Gm2860 Pseudogene Detail

Summary

• Symbol
  Gm2860
• Name
  predicted gene 2860

• Feature Type
  pseudogene
• IDs
  MGI:3781036
  NCBI Gene: 100040597
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:151678439-151679145 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 76.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781036	pseudogene	Chr3:151678428-151679146 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012472	pseudogene	Chr3:155802311-155803017 (-)
A/J	MGP_AJ_G0012468	pseudogene	Chr3:150159144-150159850 (-)
AKR/J	MGP_AKRJ_G0012432	pseudogene	Chr3:154106553-154107259 (-)
BALB/cJ	MGP_BALBcJ_G0012450	pseudogene	Chr3:149994260-149994966 (-)
C3H/HeJ	MGP_C3HHeJ_G0012313	pseudogene	Chr3:154554461-154555167 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012764	pseudogene	Chr3:160953315-160954021 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011117	pseudogene	Chr3:144998899-144999606 (-)
CAST/EiJ	MGP_CASTEiJ_G0012078	pseudogene	Chr3:154618092-154618789 (-)
CBA/J	MGP_CBAJ_G0012293	pseudogene	Chr3:166707625-166708331 (-)
DBA/2J	MGP_DBA2J_G0012346	pseudogene	Chr3:149261238-149261944 (-)
FVB/NJ	MGP_FVBNJ_G0012348	pseudogene	Chr3:146646172-146646878 (-)
LP/J	MGP_LPJ_G0012422	pseudogene	Chr3:157166839-157167545 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012354	pseudogene	Chr3:175258105-175258811 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012767	pseudogene	Chr3:153811098-153811804 (-)
PWK/PhJ	MGP_PWKPhJ_G0011917	pseudogene	Chr3:149152030-149152736 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011734	pseudogene	Chr3:151963842-151964549 (-)
WSB/EiJ	MGP_WSBEiJ_G0012106	pseudogene	Chr3:154811060-154811766 (-)

Homology

• Gene Tree
  Gm2860
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000104725 (Evidence)
• NCBI Gene
  100040597

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104725	Ensembl Gene Model | MGI Sequence Detail	707	C57BL/6J
transcript	ENSMUST00000199226	Ensembl | MGI Sequence Detail	707	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;