Gm2861 MGI Mouse Gene Detail - MGI:3781037

Sequence Map

Chr5:97343445-97355823 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781037	lncRNA gene	Chr5:97343445-97355823 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006706	lincRNA gene	Chr5:98474689-98486963 (+)
A/J	MGP_AJ_G0006700	lincRNA gene	Chr5:94849117-94861428 (+)
AKR/J	MGP_AKRJ_G0006670	lincRNA gene	Chr5:98010222-98022593 (+)
BALB/cJ	MGP_BALBcJ_G0006675	lincRNA gene	Chr5:95853960-95866303 (+)
C3H/HeJ	MGP_C3HHeJ_G0006621	lincRNA gene	Chr5:98346074-98358454 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006840	lincRNA gene	Chr5:102658691-102671926 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006098	lincRNA gene	Chr5:90223648-90236741 (+)
CAST/EiJ	MGP_CASTEiJ_G0006544	lincRNA gene	Chr5:96955258-96970718 (+)
CBA/J	MGP_CBAJ_G0006602	lincRNA gene	Chr5:106183812-106196157 (+)
DBA/2J	MGP_DBA2J_G0006623	lincRNA gene	Chr5:95056146-95068629 (+)
FVB/NJ	MGP_FVBNJ_G0006647	lincRNA gene	Chr5:93884051-93896370 (+)
LP/J	MGP_LPJ_G0006707	lincRNA gene	Chr5:99130804-99144693 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006631	lincRNA gene	Chr5:111264825-111277141 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006842	lincRNA gene	Chr5:97457188-97469719 (+)
PWK/PhJ	MGP_PWKPhJ_G0006483	lincRNA gene	Chr5:93456265-93469390 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006389	lincRNA gene	Chr5:95113083-95126454 (+)
WSB/EiJ	MGP_WSBEiJ_G0006595	lincRNA gene	Chr5:97765761-97778079 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000105850	Ensembl Gene Model \| MGI Sequence Detail	12379	C57BL/6J	± kb
	transcript	ENSMUST00000199885	Ensembl \| MGI Sequence Detail	666	Not Applicable

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Summaries

All 12

Phenotypes 6
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm2861:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr47429	Chr5:97343431-97343457 (+)	-1 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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