Gm3211 Gene Detail

Summary

• Symbol
  Gm3211
• Name
  predicted gene 3211

• Feature Type
  lncRNA gene
• IDs
  MGI:3781390
  NCBI Gene: 100041218
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:79820482-79820913 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 43.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781390	lncRNA gene	Chr9:79820482-79820913 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015748	unclassified non-coding RNA gene	Chr9:80450218-80450650 (+)
A/J	MGP_AJ_G0015725	unclassified non-coding RNA gene	Chr9:77699763-77700194 (+)
AKR/J	MGP_AKRJ_G0015689	unclassified non-coding RNA gene	Chr9:79513927-79514358 (+)
BALB/cJ	MGP_BALBcJ_G0015686	unclassified non-coding RNA gene	Chr9:77326416-77326847 (+)
C3H/HeJ	MGP_C3HHeJ_G0015508	unclassified non-coding RNA gene	Chr9:80032782-80033213 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016142	unclassified non-coding RNA gene	Chr9:82646591-82647022 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013868	unclassified non-coding RNA gene	Chr9:76839998-76840427 (+)
CAST/EiJ	MGP_CASTEiJ_G0015063	unclassified non-coding RNA gene	Chr9:80380478-80380910 (+)
CBA/J	MGP_CBAJ_G0015488	unclassified non-coding RNA gene	Chr9:85589222-85589653 (+)
DBA/2J	MGP_DBA2J_G0015586	unclassified non-coding RNA gene	Chr9:77310092-77310523 (+)
FVB/NJ	MGP_FVBNJ_G0015591	unclassified non-coding RNA gene	Chr9:76530015-76530446 (+)
LP/J	MGP_LPJ_G0015666	unclassified non-coding RNA gene	Chr9:80705474-80705906 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015614	unclassified non-coding RNA gene	Chr9:86825840-86826271 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016184	unclassified non-coding RNA gene	Chr9:79735413-79735844 (+)
PWK/PhJ	MGP_PWKPhJ_G0014844	unclassified non-coding RNA gene	Chr9:77509160-77509592 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014632	unclassified non-coding RNA gene	Chr9:79870331-79870763 (+)
WSB/EiJ	MGP_WSBEiJ_G0015167	unclassified non-coding RNA gene	Chr9:79673473-79673904 (+)

Homology

• Gene Tree
  Gm3211
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm3211
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000092581 (Evidence)
• NCBI Gene
  100041218

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092581	Ensembl Gene Model | MGI Sequence Detail	432	C57BL/6J
transcript	ENSMUST00000172721	Ensembl | MGI Sequence Detail	304	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 7
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75