Gm3331 Gene Detail

Summary

• Symbol
  Gm3331
• Name
  predicted gene 3331

• Feature Type
  lncRNA gene
• IDs
  MGI:3781509
  NCBI Gene: 100041426
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:32725030-32745400 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  838 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781509	lncRNA gene	Chr9:32694442-32745757 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007414	lincRNA gene	Chr9:30584647-30606537 (+)
A/J	MGP_AJ_G0007410	lincRNA gene	Chr9:29793500-29813855 (+)
AKR/J	MGP_AKRJ_G0007382	lincRNA gene	Chr9:30438107-30458462 (+)
BALB/cJ	MGP_BALBcJ_G0007388	lincRNA gene	Chr9:29714217-29715107 (+)
C3H/HeJ	MGP_C3HHeJ_G0007332	lincRNA gene	Chr9:30786315-30806666 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007559	lincRNA gene	Chr9:31619417-31642594 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006750	lincRNA gene	Chr9:28592828-28593726 (+)
CAST/EiJ	MGP_CASTEiJ_G0007235	lincRNA gene	Chr9:30676121-30677010 (+)
CBA/J	MGP_CBAJ_G0007314	lincRNA gene	Chr9:32681481-32705362 (+)
DBA/2J	MGP_DBA2J_G0007337	lincRNA gene	Chr9:29798015-29818658 (+)
FVB/NJ	MGP_FVBNJ_G0007358	lincRNA gene	Chr9:29205891-29226318 (+)
LP/J	MGP_LPJ_G0007419	lincRNA gene	Chr9:30803552-30826594 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007335	lincRNA gene	Chr9:34260722-34281082 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007562	lincRNA gene	Chr9:30426616-30448214 (+)
PWK/PhJ	MGP_PWKPhJ_G0007176	lincRNA gene	Chr9:29782664-29783551 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007082	lincRNA gene	Chr9:30564054-30564965 (+)
WSB/EiJ	MGP_WSBEiJ_G0007295	lincRNA gene	Chr9:30195663-30196553 (+)

Homology

• Gene Tree
  Gm3331
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  3

• Ensembl
  ENSMUSG00000099148 (Evidence)
• NCBI Gene
  100041426

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099148	Ensembl Gene Model | MGI Sequence Detail	20371	C57BL/6J
transcript	ENSMUST00000183423	Ensembl | MGI Sequence Detail	1017	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;