Gm3693 Gene Detail

Summary

• Symbol
  Gm3693
• Name
  predicted gene 3693

• Feature Type
  lncRNA gene
• IDs
  MGI:3781869
  NCBI Gene: 100042143
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:81275058-81290032 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 37.47 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  388 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781869	lncRNA gene	Chr12:81275058-81290032 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003146	antisense lncRNA gene	Chr12:81677157-81692091 (+)
A/J	MGP_AJ_G0003123	antisense lncRNA gene	Chr12:78679303-78695540 (+)
AKR/J	MGP_AKRJ_G0003103	antisense lncRNA gene	Chr12:80837979-80852934 (+)
BALB/cJ	MGP_BALBcJ_G0003110	antisense lncRNA gene	Chr12:78926287-78941202 (+)
C3H/HeJ	MGP_C3HHeJ_G0003066	antisense lncRNA gene	Chr12:81300720-81315651 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003253	antisense lncRNA gene	Chr12:84058537-84073466 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002787	antisense lncRNA gene	Chr12:75670276-75687424 (+)
CAST/EiJ	MGP_CASTEiJ_G0003035	antisense lncRNA gene	Chr12:76173126-76188073 (+)
CBA/J	MGP_CBAJ_G0003063	antisense lncRNA gene	Chr12:87321186-87336071 (+)
DBA/2J	MGP_DBA2J_G0003068	antisense lncRNA gene	Chr12:78283681-78298601 (+)
FVB/NJ	MGP_FVBNJ_G0003088	antisense lncRNA gene	Chr12:77108860-77123775 (+)
LP/J	MGP_LPJ_G0003143	antisense lncRNA gene	Chr12:81579321-81594230 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003077	antisense lncRNA gene	Chr12:90314395-90329325 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003257	antisense lncRNA gene	Chr12:80363556-80378491 (+)
PWK/PhJ	MGP_PWKPhJ_G0002993	antisense lncRNA gene	Chr12:72690297-72705477 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002937	antisense lncRNA gene	Chr12:74884965-74899853 (+)
WSB/EiJ	MGP_WSBEiJ_G0003066	antisense lncRNA gene	Chr12:81007354-81022293 (+)

Homology

• Gene Tree
  Gm3693
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3693
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098128 (Evidence)
• NCBI Gene
  100042143

Representative Sequences			Length	Strain/Species
genomic	100042143	NCBI Gene Model | MGI Sequence Detail	14975	C57BL/6J
transcript	NR_152198	RefSeq | MGI Sequence Detail	2865	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;