Gm3726 Pseudogene Detail

Summary

• Symbol
  Gm3726
• Name
  predicted gene 3726

• Feature Type
  pseudogene
• IDs
  MGI:3781901
  NCBI Gene: 100042214
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:10144598-10148393 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 6.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  207 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781901	pseudogene	Chr7:10144598-10148727 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040503	pseudogene	Chr7:7661117-7664912 (-)
A/J	MGP_AJ_G0040488	pseudogene	Chr7:7495846-7499635 (-)
AKR/J	MGP_AKRJ_G0040413	pseudogene	Chr7:7768857-7772646 (-)
BALB/cJ	MGP_BALBcJ_G0040490	pseudogene	Chr7:7633788-7637578 (-)
C3H/HeJ	MGP_C3HHeJ_G0040114	pseudogene	Chr7:7664749-7668561 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041117	pseudogene	Chr7:8096714-8100507 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039175	pseudogene	Chr7:5672605-5676391 (-)
CBA/J	MGP_CBAJ_G0040083	pseudogene	Chr7:8197917-8203676 (-)
DBA/2J	MGP_DBA2J_G0040288	pseudogene	Chr7:7429039-7432832 (-)
FVB/NJ	MGP_FVBNJ_G0040236	pseudogene	Chr7:7435040-7438829 (-)
LP/J	MGP_LPJ_G0040331	pseudogene	Chr7:7723784-7727579 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040227	pseudogene	Chr7:8204845-8208791 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041192	pseudogene	Chr7:7494513-7498619 (-)
PWK/PhJ	MGP_PWKPhJ_G0038854	pseudogene	Chr7:6029763-6033826 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038560	pseudogene	Chr7:4357605-4361397 (-)
WSB/EiJ	MGP_WSBEiJ_G0039418	pseudogene	Chr7:7628102-7636093 (-)

Homology

• Gene Tree
  Gm3726
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107520 (Evidence)
• NCBI Gene
  100042214

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107520	Ensembl Gene Model | MGI Sequence Detail	3796	C57BL/6J
transcript	ENSMUST00000203110	Ensembl | MGI Sequence Detail	785	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;