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Rbakdn Gene Detail
Summary
  • Symbol
    Rbakdn
  • Name
    RB-associated KRAB zinc finger downstream neighbor (non-protein coding)
  • Synonyms
    Gm3925
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3782099
    NCBI Gene: 100042605
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:143150534-143151506 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 81.97 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    156 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3782099
 lncRNA gene Chr5:143150534-143151506 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006846
 lincRNA gene Chr5:148479042-148480014 (-)
A/J MGP_AJ_G0006840
 lincRNA gene Chr5:142102039-142103011 (-)
AKR/J MGP_AKRJ_G0006810
 lincRNA gene Chr5:146558407-146559379 (-)
BALB/cJ MGP_BALBcJ_G0006816
 lincRNA gene Chr5:143346886-143347858 (-)
C3H/HeJ MGP_C3HHeJ_G0006761
 lincRNA gene Chr5:147357534-147358506 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006980
 lincRNA gene Chr5:153895799-153896771 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006232
 lincRNA gene Chr5:135892647-135893619 (-)
CAST/EiJ MGP_CASTEiJ_G0006680
 lincRNA gene Chr5:146851565-146852537 (-)
CBA/J MGP_CBAJ_G0006743
 lincRNA gene Chr5:160224785-160225757 (-)
DBA/2J MGP_DBA2J_G0006763
 lincRNA gene Chr5:141872743-141873715 (-)
FVB/NJ MGP_FVBNJ_G0006786
 lincRNA gene Chr5:141068829-141069801 (-)
LP/J MGP_LPJ_G0006846
 lincRNA gene Chr5:149074482-149075454 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006768
 lincRNA gene Chr5:162652441-162653413 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006983
 lincRNA gene Chr5:146395324-146396296 (-)
PWK/PhJ MGP_PWKPhJ_G0006622
 lincRNA gene Chr5:140952124-140953092 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006529
 lincRNA gene Chr5:144135126-144136099 (-)
WSB/EiJ MGP_WSBEiJ_G0006734
 lincRNA gene Chr5:147192406-147193378 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    99
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 100042605 NCBI Gene Model | MGI Sequence Detail 973 C57BL/6J ±  kb
transcript NR_040424 RefSeq | MGI Sequence Detail 636 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 99
    cDNA 99

    Microarray probesets 3
References
more
  • Summaries
    All 10
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory