Obox4-ps22 Pseudogene Detail

Summary

• Symbol
  Obox4-ps22
• Name
  oocyte specific homeobox 4, pseudogene 22
• Synonyms
  Gm4003

• Feature Type
  pseudogene
• IDs
  MGI:3782177
  NCBI Gene: 100042742
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:14986537-14988250 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 8.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782177	pseudogene	Chr7:14986491-14988253 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Obox4-ps22
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Obox4-ps22
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• Ensembl
  ENSMUSG00000094243 (Evidence)
• NCBI Gene
  100042742

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094243	Ensembl Gene Model | MGI Sequence Detail	1714	C57BL/6J
transcript	ENSMUST00000179602	Ensembl | MGI Sequence Detail	1137	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:340071 Ji S, et al., OBOX regulates mouse zygotic genome activation and early development. Nature. 2023 Aug;620(7976):1047-1053