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Gm4221 Gene Detail
Summary
  • Symbol
    Gm4221
  • Name
    predicted gene 4221
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3782397
    NCBI Gene: 100043089
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:55123367-55211472 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 29.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2109 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3782397
 lncRNA gene Chr18:55123144-55276926 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005791
 lincRNA gene Chr18:54239839-54333202 (+)
A/J MGP_AJ_G0005780
 lincRNA gene Chr18:52127449-52219864 (+)
AKR/J MGP_AKRJ_G0005757
 lincRNA gene Chr18:53565067-53653446 (+)
BALB/cJ MGP_BALBcJ_G0005759
 lincRNA gene Chr18:52309151-52398759 (+)
C3H/HeJ MGP_C3HHeJ_G0005707
 lincRNA gene Chr18:53736237-53833930 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005920
 lincRNA gene Chr18:56007334-56102276 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005263
 lincRNA gene Chr18:51833048-51923137 (+)
CAST/EiJ MGP_CASTEiJ_G0005648
 lincRNA gene Chr18:53754861-53853401 (+)
CBA/J MGP_CBAJ_G0005694
 lincRNA gene Chr18:57701401-57802675 (+)
DBA/2J MGP_DBA2J_G0005712
 lincRNA gene Chr18:51823762-51915088 (+)
FVB/NJ MGP_FVBNJ_G0005739
 lincRNA gene Chr18:51242329-51333407 (+)
LP/J MGP_LPJ_G0005793
 lincRNA gene Chr18:54246478-54350305 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005725
 lincRNA gene Chr18:59437600-59542263 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005918
 lincRNA gene Chr18:53628852-53723930 (+)
PWK/PhJ MGP_PWKPhJ_G0005593
 lincRNA gene Chr18:51838030-51933605 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005509
 lincRNA gene Chr18:53756619-53851852 (+)
WSB/EiJ MGP_WSBEiJ_G0005700
 lincRNA gene Chr18:53573703-53673274 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    77
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043089 NCBI Gene Model | MGI Sequence Detail 88106 C57BL/6J ±  kb
transcript NR_166629 RefSeq | MGI Sequence Detail 2248 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 7
    Phenotypes 1
  • Earliest
    J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory