About   Help   FAQ
Gm4409 Gene Detail
Summary
  • Symbol
    Gm4409
  • Name
    predicted gene 4409
Location &
Maps
more
  • Sequence Map
    Chr6:79903397-80000139 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 35.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2377 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3782594
 lncRNA gene Chr6:79903397-80000139 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004292
 antisense lncRNA gene Chr6:80782311-80874553 (-)
A/J MGP_AJ_G0004270
 antisense lncRNA gene Chr6:77666521-77763606 (-)
AKR/J MGP_AKRJ_G0004251
 antisense lncRNA gene Chr6:79906552-80000929 (-)
BALB/cJ MGP_BALBcJ_G0004257
 antisense lncRNA gene Chr6:77718879-77812582 (-)
C3H/HeJ MGP_C3HHeJ_G0004248
 antisense lncRNA gene Chr6:104316311-104404236 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004406
 antisense lncRNA gene Chr6:82965869-83062859 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003879
 antisense lncRNA gene Chr6:76271243-76344784 (-)
CAST/EiJ MGP_CASTEiJ_G0004167
 antisense lncRNA gene Chr6:79879774-79969554 (-)
CBA/J MGP_CBAJ_G0004199
 antisense lncRNA gene Chr6:86217752-86312880 (-)
DBA/2J MGP_DBA2J_G0004215
 antisense lncRNA gene Chr6:77015820-77108159 (-)
FVB/NJ MGP_FVBNJ_G0004230
 antisense lncRNA gene Chr6:76284363-76376925 (-)
LP/J MGP_LPJ_G0004293
 antisense lncRNA gene Chr6:80744349-80834450 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004221
 antisense lncRNA gene Chr6:90487718-90594268 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004403
 antisense lncRNA gene Chr6:79737981-79832690 (-)
PWK/PhJ MGP_PWKPhJ_G0004120
 antisense lncRNA gene Chr6:75930965-76013536 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004064
 antisense lncRNA gene Chr6:78613866-78701015 (-)
WSB/EiJ MGP_WSBEiJ_G0004203
 antisense lncRNA gene Chr6:80191579-80278946 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086739 Ensembl Gene Model | MGI Sequence Detail 96743 C57BL/6J ±  kb
transcript ENSMUST00000130734 Ensembl | MGI Sequence Detail 1919 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 5
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory