Gm4462 Pseudogene Detail

Summary

• Symbol
  Gm4462
• Name
  predicted gene 4462

• Feature Type
  pseudogene
• IDs
  MGI:3782646
  NCBI Gene: 100043475
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:20482504-20483806 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 12.49 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782646	pseudogene	Chr16:20482486-20483888 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011257	pseudogene	Chr16:18011489-18011980 (+)
A/J	MGP_AJ_G0011241	pseudogene	Chr16:17139490-17139981 (+)
AKR/J	MGP_AKRJ_G0011204	pseudogene	Chr16:17786517-17787008 (+)
BALB/cJ	MGP_BALBcJ_G0011211	pseudogene	Chr16:17297442-17297933 (+)
C3H/HeJ	MGP_C3HHeJ_G0011109	pseudogene	Chr16:17958553-17960054 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011504	pseudogene	Chr16:18360493-18360984 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011089	pseudogene	Chr16:19106935-19107426 (+)
DBA/2J	MGP_DBA2J_G0011135	pseudogene	Chr16:17065387-17065878 (+)
FVB/NJ	MGP_FVBNJ_G0011139	pseudogene	Chr16:17103879-17104370 (+)
LP/J	MGP_LPJ_G0011232	pseudogene	Chr16:17735719-17736210 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011133	pseudogene	Chr16:18786046-18786537 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm4462
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000090319 (Evidence)
• NCBI Gene
  100043475

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090319	Ensembl Gene Model | MGI Sequence Detail	1303	C57BL/6J
transcript	ENSMUST00000166453	Ensembl | MGI Sequence Detail	1303	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;