Gm4524 Gene Detail

Summary

• Symbol
  Gm4524
• Name
  predicted gene 4524

• Feature Type
  lncRNA gene
• IDs
  MGI:3782709
  NCBI Gene: 100043571
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:25775225-25779092 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 17.63 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  212 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782709	lncRNA gene	Chr16:25775225-25779092 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003334	antisense lncRNA gene	Chr16:23669539-23673406 (+)
A/J	MGP_AJ_G0003310	antisense lncRNA gene	Chr16:22557866-22561733 (+)
AKR/J	MGP_AKRJ_G0003293	antisense lncRNA gene	Chr16:23481477-23485344 (+)
BALB/cJ	MGP_BALBcJ_G0003299	antisense lncRNA gene	Chr16:22764481-22768346 (+)
C3H/HeJ	MGP_C3HHeJ_G0003252	antisense lncRNA gene	Chr16:23578012-23581879 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003441	antisense lncRNA gene	Chr16:24206763-24210630 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002960	antisense lncRNA gene	Chr16:23149718-23153596 (+)
CAST/EiJ	MGP_CASTEiJ_G0003216	antisense lncRNA gene	Chr16:23631266-23635114 (+)
CBA/J	MGP_CBAJ_G0003249	antisense lncRNA gene	Chr16:25202036-25205903 (+)
DBA/2J	MGP_DBA2J_G0003254	antisense lncRNA gene	Chr16:22503926-22507793 (+)
FVB/NJ	MGP_FVBNJ_G0003273	antisense lncRNA gene	Chr16:22486257-22490124 (+)
LP/J	MGP_LPJ_G0003327	antisense lncRNA gene	Chr16:23448952-23452819 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003262	antisense lncRNA gene	Chr16:24642891-24646758 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003443	antisense lncRNA gene	Chr16:23428884-23432745 (+)
PWK/PhJ	MGP_PWKPhJ_G0003176	antisense lncRNA gene	Chr16:22797250-22801090 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003120	antisense lncRNA gene	Chr16:23195972-23205357 (+)
WSB/EiJ	MGP_WSBEiJ_G0003251	antisense lncRNA gene	Chr16:23388820-23392678 (+)

Homology

• Gene Tree
  Gm4524
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000090257 (Evidence)
• NCBI Gene
  100043571

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090257	Ensembl Gene Model | MGI Sequence Detail	3868	C57BL/6J
transcript	ENSMUST00000161614	Ensembl | MGI Sequence Detail	2152	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;