Orai2-ps Pseudogene Detail

Summary

• Symbol
  Orai2-ps
• Name
  ORAI calcium release-activated calcium modulator 2, pseudogene
• Synonyms
  Y0G0112L11Rik

• Feature Type
  pseudogene
• IDs
  MGI:3782841
  NCBI Gene: 100043803
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:59277947-59281153 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 34.83 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782841	pseudogene	Chr16:59277947-59281153 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  100043803

Representative Sequences			Length	Strain/Species
genomic	100043803	NCBI Gene Model | MGI Sequence Detail	3207	C57BL/6J

Other
Accession IDs

MGI:3708620

References

• Summaries
  All 7
• Earliest
  J:123525 Gross SA, et al., Murine ORAI2 splice variants form functional Ca2+ release-activated Ca2+ (CRAC) channels. J Biol Chem. 2007 Jul 6;282(27):19375-84

TSS for Orai2-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr138873	Chr16:59277968-59277990 (+)	32 bp