Gm4660 Pseudogene Detail

Summary

• Symbol
  Gm4660
• Name
  predicted gene 4660

• Feature Type
  pseudogene
• IDs
  MGI:3782842
  NCBI Gene: 100043804
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:60218283-60218685 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 35.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782842	pseudogene	Chr16:60218188-60218704 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011296	pseudogene	Chr16:59704968-59705370 (-)
A/J	MGP_AJ_G0011281	pseudogene	Chr16:57194902-57195304 (-)
AKR/J	MGP_AKRJ_G0011242	pseudogene	Chr16:58958858-58959260 (-)
BALB/cJ	MGP_BALBcJ_G0011255	pseudogene	Chr16:57341850-57342252 (-)
C3H/HeJ	MGP_C3HHeJ_G0011147	pseudogene	Chr16:59204871-59205273 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011541	pseudogene	Chr16:61409646-61410048 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010122	pseudogene	Chr16:56590299-56590722 (-)
CAST/EiJ	MGP_CASTEiJ_G0010971	pseudogene	Chr16:59492045-59492445 (-)
CBA/J	MGP_CBAJ_G0011125	pseudogene	Chr16:63896784-63897186 (-)
DBA/2J	MGP_DBA2J_G0011174	pseudogene	Chr16:56889260-56889662 (-)
FVB/NJ	MGP_FVBNJ_G0011176	pseudogene	Chr16:56590138-56590540 (-)
LP/J	MGP_LPJ_G0011267	pseudogene	Chr16:59531910-59532312 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011172	pseudogene	Chr16:64388501-64388903 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011524	pseudogene	Chr16:59063660-59064062 (-)
PWK/PhJ	MGP_PWKPhJ_G0010839	pseudogene	Chr16:57138214-57138616 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010666	pseudogene	Chr16:58818267-58818667 (-)
WSB/EiJ	MGP_WSBEiJ_G0011011	pseudogene	Chr16:59105460-59105862 (-)

Homology

• Gene Tree
  Gm4660
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087636 (Evidence)
• NCBI Gene
  100043804

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087636	Ensembl Gene Model | MGI Sequence Detail	403	C57BL/6J
transcript	ENSMUST00000131499	Ensembl | MGI Sequence Detail	403	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;