Gm15560 Pseudogene Detail

Summary

• Symbol
  Gm15560
• Name
  predicted gene 15560
• Synonyms
  EG665035

• Feature Type
  pseudogene
• IDs
  MGI:3783009
  NCBI Gene: 665035
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:7683880-7684522 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 2.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783009	pseudogene	Chr10:7683880-7684522 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010491	pseudogene	Chr10:5035642-5036284 (-)
A/J	MGP_AJ_G0010481	pseudogene	Chr10:4788418-4789060 (-)
AKR/J	MGP_AKRJ_G0010447	pseudogene	Chr10:4882930-4883572 (-)
BALB/cJ	MGP_BALBcJ_G0010454	pseudogene	Chr10:4759985-4760627 (-)
C3H/HeJ	MGP_C3HHeJ_G0010386	pseudogene	Chr10:5015538-5016180 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010727	pseudogene	Chr10:5157868-5158510 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009401	pseudogene	Chr10:4382437-4383073 (-)
CAST/EiJ	MGP_CASTEiJ_G0010204	pseudogene	Chr10:4931574-4932216 (-)
CBA/J	MGP_CBAJ_G0010352	pseudogene	Chr10:5308175-5308817 (-)
DBA/2J	MGP_DBA2J_G0010383	pseudogene	Chr10:4716093-4716735 (-)
FVB/NJ	MGP_FVBNJ_G0010407	pseudogene	Chr10:4663016-4663658 (-)
LP/J	MGP_LPJ_G0010473	pseudogene	Chr10:4878331-4880694 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010371	pseudogene	Chr10:5262795-5263437 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010697	pseudogene	Chr10:4834581-4835223 (-)
PWK/PhJ	MGP_PWKPhJ_G0010107	pseudogene	Chr10:4692135-4692778 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009922	pseudogene	Chr10:4916271-4916911 (-)
WSB/EiJ	MGP_WSBEiJ_G0010274	pseudogene	Chr10:4837260-4837902 (-)

Homology

• Gene Tree
  Gm15560
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081497 (Evidence)
• NCBI Gene
  665035

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081497	Ensembl Gene Model | MGI Sequence Detail	643	C57BL/6J
transcript	ENSMUST00000117107	Ensembl | MGI Sequence Detail	643	Not Applicable

Other
Accession IDs

MGI:3648133

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;