Gm15568 Pseudogene Detail

Summary

• Symbol
  Gm15568
• Name
  predicted gene 15568
• Synonyms
  EG665110

• Feature Type
  pseudogene
• IDs
  MGI:3783017
  NCBI Gene: 665110
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:10218859-10220071 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 3.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783017	pseudogene	Chr10:10218843-10220252 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010492	pseudogene	Chr10:7693943-7695154 (+)
A/J	MGP_AJ_G0010482	pseudogene	Chr10:7327061-7328273 (+)
AKR/J	MGP_AKRJ_G0010448	pseudogene	Chr10:7516516-7517728 (+)
BALB/cJ	MGP_BALBcJ_G0010455	pseudogene	Chr10:7302324-7303536 (+)
C3H/HeJ	MGP_C3HHeJ_G0010387	pseudogene	Chr10:7658730-7659942 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010728	pseudogene	Chr10:7884469-7885681 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010290	pseudogene	Chr19:9746650-9747803 (+)
CAST/EiJ	MGP_CASTEiJ_G0010205	pseudogene	Chr10:7575638-7576854 (+)
CBA/J	MGP_CBAJ_G0010353	pseudogene	Chr10:8151397-8152609 (+)
DBA/2J	MGP_DBA2J_G0010384	pseudogene	Chr10:7248895-7250106 (+)
FVB/NJ	MGP_FVBNJ_G0010408	pseudogene	Chr10:7188444-7189655 (+)
LP/J	MGP_LPJ_G0010474	pseudogene	Chr10:7485960-7487172 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010373	pseudogene	Chr10:8029757-8030969 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010698	pseudogene	Chr10:7454275-7455486 (+)
PWK/PhJ	MGP_PWKPhJ_G0010108	pseudogene	Chr10:7203846-7205061 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009923	pseudogene	Chr10:7524769-7525992 (+)
WSB/EiJ	MGP_WSBEiJ_G0010275	pseudogene	Chr10:7464310-7465522 (+)

Homology

• Gene Tree
  Gm15568
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083257 (Evidence)
• NCBI Gene
  665110

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083257	Ensembl Gene Model | MGI Sequence Detail	1213	C57BL/6J
transcript	ENSMUST00000118589	Ensembl | MGI Sequence Detail	1213	Not Applicable

Other
Accession IDs

MGI:3646614

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm15568:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr92346	Chr10:10218841-10218845 (+)	-16 bp