Gm15593 Pseudogene Detail

Summary

• Symbol
  Gm15593
• Name
  predicted gene 15593
• Synonyms
  EG386426

• Feature Type
  pseudogene
• IDs
  MGI:3783040
  NCBI Gene: 386426
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:18144733-18145740 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 8.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783040	pseudogene	Chr6:18144714-18145943 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013375	pseudogene	Chr6:15427781-15428787 (+)
A/J	MGP_AJ_G0013357	pseudogene	Chr6:14799027-14800054 (+)
AKR/J	MGP_AKRJ_G0013318	pseudogene	Chr6:15318684-15319516 (+)
BALB/cJ	MGP_BALBcJ_G0013336	pseudogene	Chr6:14890660-14893312 (+)
C3H/HeJ	MGP_C3HHeJ_G0013184	pseudogene	Chr6:15189293-15190221 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013708	pseudogene	Chr6:15917929-15919267 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011826	pseudogene	Chr6:13742557-13743564 (+)
CAST/EiJ	MGP_CASTEiJ_G0012901	pseudogene	Chr6:15096143-15097149 (+)
CBA/J	MGP_CBAJ_G0013154	pseudogene	Chr6:16440786-16441792 (+)
DBA/2J	MGP_DBA2J_G0013237	pseudogene	Chr6:14725037-14726751 (+)
FVB/NJ	MGP_FVBNJ_G0013234	pseudogene	Chr6:14560946-14561962 (+)
LP/J	MGP_LPJ_G0013306	pseudogene	Chr6:15533079-15534918 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013253	pseudogene	Chr6:17573251-17574569 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013709	pseudogene	Chr6:15202307-15203313 (+)
PWK/PhJ	MGP_PWKPhJ_G0012713	pseudogene	Chr6:14393015-14394211 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012495	pseudogene	Chr6:15085772-15086653 (+)
WSB/EiJ	MGP_WSBEiJ_G0012942	pseudogene	Chr6:15136814-15137749 (+)

Homology

• Gene Tree
  Gm15593
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084203 (Evidence)
• NCBI Gene
  386426

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084203	Ensembl Gene Model | MGI Sequence Detail	1008	C57BL/6J
transcript	ENSMUST00000122085	Ensembl | MGI Sequence Detail	1008	Not Applicable

Other
Accession IDs

MGI:3648984

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;