Gm15707 Pseudogene Detail

Summary

• Symbol
  Gm15707
• Name
  predicted gene 15707
• Synonyms
  EG546917

• Feature Type
  pseudogene
• IDs
  MGI:3783147
  NCBI Gene: 546917
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:145261339-145262334 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 77.37 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783147	pseudogene	Chr6:145260860-145262438 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013766	pseudogene	Chr6:150306060-150307055 (-)
A/J	MGP_AJ_G0013761	pseudogene	Chr6:144355229-144356224 (-)
AKR/J	MGP_AKRJ_G0013716	pseudogene	Chr6:148653999-148654994 (-)
BALB/cJ	MGP_BALBcJ_G0013742	pseudogene	Chr6:144111043-144112038 (-)
C3H/HeJ	MGP_C3HHeJ_G0013572	pseudogene	Chr6:148690020-148691015 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014137	pseudogene	Chr6:154358719-154359714 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012083	pseudogene	Chr6:143109431-143110420 (-)
CAST/EiJ	MGP_CASTEiJ_G0013257	pseudogene	Chr6:148317584-148318579 (-)
CBA/J	MGP_CBAJ_G0013549	pseudogene	Chr6:160220956-160221951 (-)
DBA/2J	MGP_DBA2J_G0013630	pseudogene	Chr6:143158254-143159249 (-)
FVB/NJ	MGP_FVBNJ_G0013626	pseudogene	Chr6:141888905-141889900 (-)
LP/J	MGP_LPJ_G0013711	pseudogene	Chr6:150410140-150411135 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013641	pseudogene	Chr6:164006327-164007322 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014118	pseudogene	Chr6:148488533-148489528 (-)
PWK/PhJ	MGP_PWKPhJ_G0013068	pseudogene	Chr6:141665588-141666583 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012846	pseudogene	Chr6:146650725-146651721 (-)
WSB/EiJ	MGP_WSBEiJ_G0013318	pseudogene	Chr6:149084763-149085758 (-)

Homology

• Gene Tree
  Gm15707
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083962 (Evidence)
• NCBI Gene
  546917

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083962	Ensembl Gene Model | MGI Sequence Detail	996	C57BL/6J
transcript	ENSMUST00000118804	Ensembl | MGI Sequence Detail	996	Not Applicable

Other
Accession IDs

MGI:3647951

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;