Gm15711 Pseudogene Detail

Summary

• Symbol
  Gm15711
• Name
  predicted gene 15711
• Synonyms
  EG667484

• Feature Type
  pseudogene
• IDs
  MGI:3783153
  NCBI Gene: 667484
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:43132957-43133491 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 28.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3783153	pseudogene	Chr16:43132856-43133628 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011282	pseudogene	Chr16:42005199-42007297 (+)
A/J	MGP_AJ_G0011269	pseudogene	Chr16:40102031-40103155 (+)
AKR/J	MGP_AKRJ_G0011230	pseudogene	Chr16:41419472-41420511 (+)
BALB/cJ	MGP_BALBcJ_G0011238	pseudogene	Chr16:40093763-40094297 (+)
C3H/HeJ	MGP_C3HHeJ_G0011135	pseudogene	Chr16:41598314-41598848 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011529	pseudogene	Chr16:42987973-42988507 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010267	pseudogene	Chr18:49877653-49878206 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011114	pseudogene	Chr16:44816609-44817606 (+)
DBA/2J	MGP_DBA2J_G0011162	pseudogene	Chr16:39836454-39836988 (+)
FVB/NJ	MGP_FVBNJ_G0011163	pseudogene	Chr16:39824593-39825562 (+)
LP/J	MGP_LPJ_G0011409	pseudogene	Chr18:52130577-52131121 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011156	pseudogene	Chr16:44210835-44212777 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011511	pseudogene	Chr16:41422069-41422603 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15711
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000082570 (Evidence)
• NCBI Gene
  667484

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082570	Ensembl Gene Model | MGI Sequence Detail	535	C57BL/6J
transcript	ENSMUST00000118889	Ensembl | MGI Sequence Detail	535	Not Applicable

Other
Accession IDs

MGI:3645693

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;