Gm15851 Gene Detail

Summary

• Symbol
  Gm15851
• Name
  predicted gene 15851

• Feature Type
  lncRNA gene
• IDs
  MGI:3801734
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:133834269-133842560 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 58.02 cM

Strain
Comparison

• SNPs within 2kb
  324 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801734	lncRNA gene	Chr1:133834269-133842560 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002746	antisense lncRNA gene	Chr1:137537497-137545788 (+)
A/J	MGP_AJ_G0002722	antisense lncRNA gene	Chr1:132370345-132378501 (+)
AKR/J	MGP_AKRJ_G0002703	antisense lncRNA gene	Chr1:136312805-136321096 (+)
BALB/cJ	MGP_BALBcJ_G0002709	antisense lncRNA gene	Chr1:132702216-132710750 (+)
C3H/HeJ	MGP_C3HHeJ_G0002667	antisense lncRNA gene	Chr1:136413133-136421209 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002852	antisense lncRNA gene	Chr1:142563500-142571634 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002399	antisense lncRNA gene	Chr1:125516732-125525008 (+)
CAST/EiJ	MGP_CASTEiJ_G0002640	antisense lncRNA gene	Chr1:135458583-135468024 (+)
CBA/J	MGP_CBAJ_G0002663	antisense lncRNA gene	Chr1:147455785-147469710 (+)
DBA/2J	MGP_DBA2J_G0002669	antisense lncRNA gene	Chr1:131384507-131392987 (+)
FVB/NJ	MGP_FVBNJ_G0002689	antisense lncRNA gene	Chr1:130007058-130015279 (+)
LP/J	MGP_LPJ_G0002747	antisense lncRNA gene	Chr1:138806632-138816787 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002679	antisense lncRNA gene	Chr1:153200103-153209777 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002857	antisense lncRNA gene	Chr1:136037927-136047213 (+)
PWK/PhJ	MGP_PWKPhJ_G0002597	antisense lncRNA gene	Chr1:130393440-130401774 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002549	antisense lncRNA gene	Chr1:135004375-135014334 (+)
WSB/EiJ	MGP_WSBEiJ_G0002669	antisense lncRNA gene	Chr1:136065844-136073983 (+)

Homology

• Gene Tree
  Gm15851
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm15851
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000090208 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090208	Ensembl Gene Model | MGI Sequence Detail	8292	C57BL/6J
transcript	ENSMUST00000160564	Ensembl | MGI Sequence Detail	662	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm15851:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8827	Chr1:133842375-133842407 (+)	8,122 bp