Gm16149 Pseudogene Detail

Summary

• Symbol
  Gm16149
• Name
  predicted gene 16149

• Feature Type
  pseudogene
• IDs
  MGI:3801828
  NCBI Gene: 100462961
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:3819299-3819607 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 2.06 cM

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801828	pseudogene	Chr10:3819072-3819626 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010487	pseudogene	Chr10:810420-810728 (-)
A/J	MGP_AJ_G0010476	pseudogene	Chr10:781253-781561 (-)
AKR/J	MGP_AKRJ_G0010443	pseudogene	Chr10:759069-759377 (-)
BALB/cJ	MGP_BALBcJ_G0010450	pseudogene	Chr10:747977-748285 (-)
C3H/HeJ	MGP_C3HHeJ_G0010381	pseudogene	Chr10:828043-828351 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010722	pseudogene	Chr10:804270-804578 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009396	pseudogene	Chr10:628353-628661 (-)
CAST/EiJ	MGP_CASTEiJ_G0010200	pseudogene	Chr10:860594-860903 (-)
CBA/J	MGP_CBAJ_G0010347	pseudogene	Chr10:807680-807988 (-)
DBA/2J	MGP_DBA2J_G0010379	pseudogene	Chr10:786025-786333 (-)
FVB/NJ	MGP_FVBNJ_G0010402	pseudogene	Chr10:746518-746826 (-)
LP/J	MGP_LPJ_G0010469	pseudogene	Chr10:820208-820516 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010367	pseudogene	Chr10:808292-808600 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010693	pseudogene	Chr10:763858-764166 (-)
PWK/PhJ	MGP_PWKPhJ_G0010103	pseudogene	Chr10:778689-778998 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009917	pseudogene	Chr10:955978-956294 (-)
WSB/EiJ	MGP_WSBEiJ_G0010271	pseudogene	Chr10:801510-801818 (-)

Homology

• Gene Tree
  Gm16149
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082123 (Evidence)
• NCBI Gene
  100462961

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082123	Ensembl Gene Model | MGI Sequence Detail	309	C57BL/6J
transcript	ENSMUST00000117631	Ensembl | MGI Sequence Detail	309	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;