Gm15867 Gene Detail

Summary

• Symbol
  Gm15867
• Name
  predicted gene 15867

• Feature Type
  lncRNA gene
• IDs
  MGI:3801862
  NCBI Gene: 100503471
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:192537236-192539164 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 97.55 cM

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801862	lncRNA gene	Chr1:192537231-192539259 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002831	antisense lncRNA gene	Chr1:199922618-199923941 (+)
A/J	MGP_AJ_G0002808	antisense lncRNA gene	Chr1:191706775-191708098 (+)
AKR/J	MGP_AKRJ_G0002789	antisense lncRNA gene	Chr1:197417293-197418616 (+)
BALB/cJ	MGP_BALBcJ_G0002795	antisense lncRNA gene	Chr1:192384010-192385333 (+)
C3H/HeJ	MGP_C3HHeJ_G0002753	antisense lncRNA gene	Chr1:198265976-198267299 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002937	antisense lncRNA gene	Chr1:206291171-206292494 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002483	antisense lncRNA gene	Chr1:182584236-182585560 (+)
CAST/EiJ	MGP_CASTEiJ_G0002725	antisense lncRNA gene	Chr1:197847937-197849252 (+)
CBA/J	MGP_CBAJ_G0002748	antisense lncRNA gene	Chr1:213927269-213928592 (+)
DBA/2J	MGP_DBA2J_G0002755	antisense lncRNA gene	Chr1:190433822-190435145 (+)
FVB/NJ	MGP_FVBNJ_G0002775	antisense lncRNA gene	Chr1:188551568-188552891 (+)
LP/J	MGP_LPJ_G0002831	antisense lncRNA gene	Chr1:201104631-201105954 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002765	antisense lncRNA gene	Chr1:220544725-220546048 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002942	antisense lncRNA gene	Chr1:197241212-197242535 (+)
PWK/PhJ	MGP_PWKPhJ_G0002683	antisense lncRNA gene	Chr1:189740458-189741781 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002633	antisense lncRNA gene	Chr1:196274264-196275593 (+)
WSB/EiJ	MGP_WSBEiJ_G0002754	antisense lncRNA gene	Chr1:197535366-197536689 (+)

Homology

• Gene Tree
  Gm15867
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000089812 (Evidence)
• NCBI Gene
  100503471

Representative Sequences			Length	Strain/Species
genomic	100503471	NCBI Gene Model | MGI Sequence Detail	1929	C57BL/6J
transcript	NR_131748	RefSeq | MGI Sequence Detail	993	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 9

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

TSS for Gm15867:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr10809	Chr1:192537224-192537245 (+)	-1 bp