Gm15908 Gene Detail

Summary

• Symbol
  Gm15908
• Name
  predicted gene 15908

• Feature Type
  lncRNA gene
• IDs
  MGI:3801931
  NCBI Gene: 101056149
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:34836906-34850757 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 14.16 cM

Strain
Comparison

• SNPs within 2kb
  606 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801931	lncRNA gene	Chr13:34836906-34850757 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015254	unclassified non-coding RNA gene	Chr13:32781097-32794932 (+)
A/J	MGP_AJ_G0015228	unclassified non-coding RNA gene	Chr13:31797121-31810963 (+)
AKR/J	MGP_AKRJ_G0015191	unclassified non-coding RNA gene	Chr13:32562543-32576384 (+)
BALB/cJ	MGP_BALBcJ_G0015190	unclassified non-coding RNA gene	Chr13:31870642-31884499 (+)
C3H/HeJ	MGP_C3HHeJ_G0015014	unclassified non-coding RNA gene	Chr13:32495552-32509404 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015647	unclassified non-coding RNA gene	Chr13:33845700-33859550 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013389	unclassified non-coding RNA gene	Chr13:30110447-30124475 (+)
CAST/EiJ	MGP_CASTEiJ_G0014567	unclassified non-coding RNA gene	Chr13:32152696-32169056 (+)
CBA/J	MGP_CBAJ_G0014993	unclassified non-coding RNA gene	Chr13:35326504-35340343 (+)
DBA/2J	MGP_DBA2J_G0015086	unclassified non-coding RNA gene	Chr13:31338842-31352687 (+)
FVB/NJ	MGP_FVBNJ_G0015097	unclassified non-coding RNA gene	Chr13:30901692-30915538 (+)
LP/J	MGP_LPJ_G0015167	unclassified non-coding RNA gene	Chr13:33012534-33026367 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015124	unclassified non-coding RNA gene	Chr13:35525625-35539468 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015686	unclassified non-coding RNA gene	Chr13:32208264-32222102 (+)
PWK/PhJ	MGP_PWKPhJ_G0014359	unclassified non-coding RNA gene	Chr13:31464245-31480285 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014146	unclassified non-coding RNA gene	Chr13:30856195-30870048 (+)
WSB/EiJ	MGP_WSBEiJ_G0014670	unclassified non-coding RNA gene	Chr13:32574866-32589658 (+)

Homology

• Gene Tree
  Gm15908
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15908
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000086786 (Evidence)
• NCBI Gene
  101056149

Representative Sequences			Length	Strain/Species
genomic	101056149	NCBI Gene Model | MGI Sequence Detail	13852	C57BL/6J
transcript	NR_105041	RefSeq | MGI Sequence Detail	1091	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 16

  Phenotypes 8
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44

TSS for Gm15908:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119223	Chr13:34836893-34836924 (+)	3 bp