Gm16074 Pseudogene Detail

Summary

• Symbol
  Gm16074
• Name
  predicted gene 16074

• Feature Type
  pseudogene
• IDs
  MGI:3801963
  NCBI Gene: 100416455
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:3942371-3942814 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 2.06 cM

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801963	pseudogene	Chr10:3942094-3944984 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010489	pseudogene	Chr10:948020-948463 (+)
A/J	MGP_AJ_G0010478	pseudogene	Chr10:909163-909727 (+)
AKR/J	MGP_AKRJ_G0010445	pseudogene	Chr10:885889-886332 (+)
BALB/cJ	MGP_BALBcJ_G0010452	pseudogene	Chr10:871192-871635 (+)
C3H/HeJ	MGP_C3HHeJ_G0010383	pseudogene	Chr10:957661-958104 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010724	pseudogene	Chr10:942656-943099 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009398	pseudogene	Chr10:747526-747981 (+)
CAST/EiJ	MGP_CASTEiJ_G0010201	pseudogene	Chr10:985986-988163 (+)
CBA/J	MGP_CBAJ_G0010349	pseudogene	Chr10:959658-960101 (+)
DBA/2J	MGP_DBA2J_G0010381	pseudogene	Chr10:909583-910026 (+)
FVB/NJ	MGP_FVBNJ_G0010404	pseudogene	Chr10:866159-866602 (+)
LP/J	MGP_LPJ_G0010471	pseudogene	Chr10:954211-954654 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010369	pseudogene	Chr10:938160-938603 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010695	pseudogene	Chr10:899077-899520 (+)
PWK/PhJ	MGP_PWKPhJ_G0010104	pseudogene	Chr10:901115-901569 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009919	pseudogene	Chr10:1088787-1089225 (+)
WSB/EiJ	MGP_WSBEiJ_G0010272	pseudogene	Chr10:930403-930846 (+)

Homology

• Gene Tree
  Gm16074
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082247 (Evidence)
• NCBI Gene
  100416455

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082247	Ensembl Gene Model | MGI Sequence Detail	444	C57BL/6J
transcript	ENSMUST00000119524	Ensembl | MGI Sequence Detail	444	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;