Gm15974 Pseudogene Detail

Summary

• Symbol
  Gm15974
• Name
  predicted gene 15974

• Feature Type
  pseudogene
• IDs
  MGI:3801981
  NCBI Gene: 100416108
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:68678275-68678805 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 39.30 cM

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3801981	pseudogene	Chr17:68678275-68678867 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011389	pseudogene	Chr17:70682939-70683469 (-)
A/J	MGP_AJ_G0011380	pseudogene	Chr17:68545159-68545689 (-)
AKR/J	MGP_AKRJ_G0011346	pseudogene	Chr17:69515089-69515619 (-)
BALB/cJ	MGP_BALBcJ_G0011362	pseudogene	Chr17:68483334-68483864 (-)
C3H/HeJ	MGP_C3HHeJ_G0011247	pseudogene	Chr17:70417312-70417842 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011653	pseudogene	Chr17:73277781-73278311 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010207	pseudogene	Chr17:64463798-64464335 (-)
CAST/EiJ	MGP_CASTEiJ_G0011058	pseudogene	Chr17:70801020-70801550 (-)
CBA/J	MGP_CBAJ_G0011227	pseudogene	Chr17:76269789-76270319 (-)
DBA/2J	MGP_DBA2J_G0011279	pseudogene	Chr17:67250592-67251122 (-)
FVB/NJ	MGP_FVBNJ_G0011282	pseudogene	Chr17:66734532-66735062 (-)
LP/J	MGP_LPJ_G0011350	pseudogene	Chr17:71406302-71406832 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011274	pseudogene	Chr17:76252421-76252951 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011634	pseudogene	Chr17:69975243-69975773 (-)
PWK/PhJ	MGP_PWKPhJ_G0010926	pseudogene	Chr17:66574707-66575237 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010745	pseudogene	Chr17:66704804-66705341 (-)
WSB/EiJ	MGP_WSBEiJ_G0011095	pseudogene	Chr17:70727447-70727977 (-)

Homology

• Gene Tree
  Gm15974
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000090224 (Evidence)
• NCBI Gene
  100416108

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090224	Ensembl Gene Model | MGI Sequence Detail	531	C57BL/6J
transcript	ENSMUST00000159103	Ensembl | MGI Sequence Detail	531	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;