Gm11175 Gene Detail

Summary

• Symbol
  Gm11175
• Name
  predicted gene 11175

• Feature Type
  lncRNA gene
• IDs
  MGI:3809055
  NCBI Gene: 100303737
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:71151811-71152729 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 34.15 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  49 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3809055	lncRNA gene	Chr8:71151811-71152729 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0033720	protein coding gene	Chr8:70988304-70988846 (-)
A/J	MGP_AJ_G0033703	protein coding gene	Chr8:68103161-68103703 (-)
AKR/J	MGP_AKRJ_G0033628	protein coding gene	Chr8:70050028-70050570 (-)
BALB/cJ	MGP_BALBcJ_G0033699	protein coding gene	Chr8:68337376-68337918 (-)
C3H/HeJ	MGP_C3HHeJ_G0033409	protein coding gene	Chr8:70691087-70691629 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0034216	protein coding gene	Chr8:73661760-73662302 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0031160	protein coding gene	Chr8:62917704-62918246 (-)
CAST/EiJ	MGP_CASTEiJ_G0032734	protein coding gene	Chr8:70173503-70174045 (-)
CBA/J	MGP_CBAJ_G0033387	protein coding gene	Chr8:76324461-76325003 (-)
DBA/2J	MGP_DBA2J_G0033541	protein coding gene	Chr8:67817764-67818306 (-)
FVB/NJ	MGP_FVBNJ_G0033482	protein coding gene	Chr8:66942590-66943132 (-)
LP/J	MGP_LPJ_G0033628	protein coding gene	Chr8:71010850-71011392 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0033525	protein coding gene	Chr8:78968564-78969106 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034234	protein coding gene	Chr8:70227261-70227803 (-)
PWK/PhJ	MGP_PWKPhJ_G0032442	protein coding gene	Chr8:67118824-67119366 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0032278	protein coding gene	Chr8:69197511-69198053 (-)
WSB/EiJ	MGP_WSBEiJ_G0032849	protein coding gene	Chr8:70599784-70600326 (-)

Homology

• Gene Tree
  Gm11175
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11175
• Find Mice (IMSR)
  3 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• UniProt
  1

• Ensembl
  ENSMUSG00000080058 (Evidence)
• NCBI Gene
  100303737

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080058	Ensembl Gene Model | MGI Sequence Detail	919	C57BL/6J
transcript	ENSMUST00000116172	Ensembl | MGI Sequence Detail	543	Not Applicable
polypeptide	Q3UXY7	UniProt | EBI | MGI Sequence Detail	180	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;