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Snord96a Gene Detail
Summary
  • Symbol
    Snord96a
  • Name
    small nucleolar RNA, C/D box 96A
  • Synonyms
    U96, U96a, Z37
  • Feature Type
    snoRNA gene
  • IDs
    MGI:3819568
    NCBI Gene: 100216534
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:48692860-48692936 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 28.77 cM
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819568
 snoRNA gene Chr11:48692859-48692939 (+)
129S1/SvImJ MGP_129S1SvImJ_G0038564
 snoRNA gene Chr11:47830067-47830147 (+)
A/J MGP_AJ_G0038554
 snoRNA gene Chr11:45925993-45926073 (+)
AKR/J MGP_AKRJ_G0038492
 snoRNA gene Chr11:47349027-47349107 (+)
BALB/cJ MGP_BALBcJ_G0038541
 snoRNA gene Chr11:46139784-46139864 (+)
C3H/HeJ MGP_C3HHeJ_G0038204
 snoRNA gene Chr11:47356068-47356148 (+)
C57BL/6NJ MGP_C57BL6NJ_G0039079
 snoRNA gene Chr11:49264491-49264571 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0035857
 snoRNA gene Chr11:43791552-43791632 (+)
CAST/EiJ MGP_CASTEiJ_G0037348
 snoRNA gene Chr11:47520108-47520188 (+)
CBA/J MGP_CBAJ_G0038176
 snoRNA gene Chr11:51523600-51523680 (+)
DBA/2J MGP_DBA2J_G0038366
 snoRNA gene Chr11:45780352-45780432 (+)
FVB/NJ MGP_FVBNJ_G0038317
 snoRNA gene Chr11:45374104-45374184 (+)
LP/J MGP_LPJ_G0038406
 snoRNA gene Chr11:48073172-48073252 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0038316
 snoRNA gene Chr11:52984245-52984325 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0039188
 snoRNA gene Chr11:47513599-47513679 (+)
PWK/PhJ MGP_PWKPhJ_G0037034
 snoRNA gene Chr11:46174145-46174225 (+)
SPRET/EiJ MGP_SPRETEiJ_G0036790
 snoRNA gene Chr11:47247437-47247517 (+)
WSB/EiJ MGP_WSBEiJ_G0037579
 snoRNA gene Chr11:47146808-47146888 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    1
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100216534 NCBI Gene Model | MGI Sequence Detail 77 C57BL/6J ±  kb
transcript NR_028563 RefSeq | MGI Sequence Detail 77 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Other 1
References
more
  • Summaries
    All 6
    Developmental Gene Expression 1
  • Earliest
    J:223207 Volta V, et al., RACK1 depletion in a mouse model causes lethality, pigmentation deficits and reduction in protein synthesis efficiency. Cell Mol Life Sci. 2013 Apr;70(8):1439-50
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory