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Gm16538 Gene Detail
Summary
  • Symbol
    Gm16538
  • Name
    predicted gene 16538
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4414958
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:5777176-5782483 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 4.34 cM
Strain
Comparison
more
  • SNPs within 2kb
    201 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4414958
 lncRNA gene Chr19:5777176-5782483 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003466
 antisense lncRNA gene Chr19:2713053-2717474 (+)
A/J MGP_AJ_G0003445
 antisense lncRNA gene Chr19:2567248-2571668 (+)
AKR/J MGP_AKRJ_G0003425
 antisense lncRNA gene Chr19:2635949-2640369 (+)
BALB/cJ MGP_BALBcJ_G0003434
 antisense lncRNA gene Chr19:2562365-2566785 (+)
C3H/HeJ MGP_C3HHeJ_G0003383
 antisense lncRNA gene Chr19:2651006-2655426 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003572
 antisense lncRNA gene Chr19:2783485-2787906 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003084
 antisense lncRNA gene Chr19:2476823-2481227 (+)
CAST/EiJ MGP_CASTEiJ_G0003346
 antisense lncRNA gene Chr19:2670801-2675221 (+)
CBA/J MGP_CBAJ_G0003380
 antisense lncRNA gene Chr19:2911331-2915752 (+)
DBA/2J MGP_DBA2J_G0003388
 antisense lncRNA gene Chr19:2562593-2567014 (+)
FVB/NJ MGP_FVBNJ_G0003406
 antisense lncRNA gene Chr19:2559662-2564082 (+)
LP/J MGP_LPJ_G0003460
 antisense lncRNA gene Chr19:2688078-2692499 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003394
 antisense lncRNA gene Chr19:2749259-2753679 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003575
 antisense lncRNA gene Chr19:2653005-2657426 (+)
PWK/PhJ MGP_PWKPhJ_G0003302
 antisense lncRNA gene Chr19:2586194-2590612 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003247
 antisense lncRNA gene Chr19:2639068-2643497 (+)
WSB/EiJ MGP_WSBEiJ_G0003380
 antisense lncRNA gene Chr19:2664084-2668504 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000089766 Ensembl Gene Model | MGI Sequence Detail 5308 C57BL/6J ±  kb
transcript ENSMUST00000162407 Ensembl | MGI Sequence Detail 1328 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
07/05/2024
MGI 6.24 		The Jackson Laboratory