Rr5 Other Genome Feature Detail

Summary

• Symbol
  Rr5
• Name
  regulatory region 5
• Synonyms
  ENE-RARE, Hoxb4 early neuronal enhancer

• Feature Type
  response element
• IDs
  MGI:4437616
• Regulates expression of
  Hoxb4 (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr11:96215146-96215162 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• chr11:96215146-96215162 (GRCm39)

• Genetic Map
  Chromosome 11, Syntenic

Strain
Comparison

• SNPs within 2kb
  64 from dbSNP Build 142

References

• Summaries
  All 3
• Earliest
  J:158049 Gould A, et al., Initiation of rhombomeric Hoxb4 expression requires induction by somites and a retinoid pathway. Neuron. 1998 Jul;21(1):39-51
• Latest
  J:208763 Ahn Y, et al., Long-range regulation by shared retinoic acid response elements modulates dynamic expression of posterior Hoxb genes in CNS development. Dev Biol. 2014 Apr 1;388(1):134-44

Rr5 regulates expression of:

Feature	Feature Type	Location	Reference
Hoxb4, homeobox B4	protein coding gene	Chr11:96209093-96212464 (+)	J:208763