Gm16726 Gene Detail

Summary

• Symbol
  Gm16726
• Name
  predicted gene, 16726

• Feature Type
  lncRNA gene
• IDs
  MGI:4439650
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr19:46252978-46256108 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 38.77 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439650	lncRNA gene	Chr19:46252978-46256108 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015389	unclassified non-coding RNA gene	Chr19:45944604-45947737 (-)
A/J	MGP_AJ_G0015364	unclassified non-coding RNA gene	Chr19:43681547-43684677 (-)
AKR/J	MGP_AKRJ_G0015328	unclassified non-coding RNA gene	Chr19:45098179-45101312 (-)
BALB/cJ	MGP_BALBcJ_G0015328	unclassified non-coding RNA gene	Chr19:43740258-43743388 (-)
C3H/HeJ	MGP_C3HHeJ_G0015152	unclassified non-coding RNA gene	Chr19:45265093-45268226 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015782	unclassified non-coding RNA gene	Chr19:47091060-47094190 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013523	unclassified non-coding RNA gene	Chr19:42918871-42922156 (-)
CAST/EiJ	MGP_CASTEiJ_G0014703	unclassified non-coding RNA gene	Chr19:45051146-45054279 (-)
CBA/J	MGP_CBAJ_G0015131	unclassified non-coding RNA gene	Chr19:49444792-49447925 (-)
DBA/2J	MGP_DBA2J_G0015226	unclassified non-coding RNA gene	Chr19:43504242-43507372 (-)
FVB/NJ	MGP_FVBNJ_G0015233	unclassified non-coding RNA gene	Chr19:43281775-43284908 (-)
LP/J	MGP_LPJ_G0015306	unclassified non-coding RNA gene	Chr19:45852551-45855684 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015259	unclassified non-coding RNA gene	Chr19:48794025-48797158 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015821	unclassified non-coding RNA gene	Chr19:45205881-45209014 (-)
PWK/PhJ	MGP_PWKPhJ_G0014493	unclassified non-coding RNA gene	Chr19:43442104-43445228 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014280	unclassified non-coding RNA gene	Chr19:43856058-43859195 (-)
WSB/EiJ	MGP_WSBEiJ_G0014810	unclassified non-coding RNA gene	Chr19:45344670-45347803 (-)

Homology

• Gene Tree
  Gm16726
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000086816 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086816	Ensembl Gene Model | MGI Sequence Detail	3131	C57BL/6J
transcript	ENSMUST00000130184	Ensembl | MGI Sequence Detail	892	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm16726:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr159613	Chr19:46256147-46256154 (-)	-43 bp
Tssr159612	Chr19:46256113-46256141 (-)	-19 bp