About   Help   FAQ
Gm16838 Gene Detail
Summary
  • Symbol
    Gm16838
  • Name
    predicted gene, 16838
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4439762
    NCBI Gene: 102640237
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:65745528-65756233 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 30.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    498 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439762
 lncRNA gene Chr6:65745528-65756233 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004282
 antisense lncRNA gene Chr6:65702576-65713279 (-)
A/J MGP_AJ_G0004260
 antisense lncRNA gene Chr6:62840644-62851347 (-)
AKR/J MGP_AKRJ_G0004241
 antisense lncRNA gene Chr6:64806987-64817688 (-)
BALB/cJ MGP_BALBcJ_G0004247
 antisense lncRNA gene Chr6:63235463-63246150 (-)
C3H/HeJ MGP_C3HHeJ_G0004258
 antisense lncRNA gene Chr6:119381030-119391713 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004396
 antisense lncRNA gene Chr6:67238746-67249435 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003869
 antisense lncRNA gene Chr6:60120049-60133099 (-)
CAST/EiJ MGP_CASTEiJ_G0004157
 antisense lncRNA gene Chr6:65099600-65110301 (-)
CBA/J MGP_CBAJ_G0004189
 antisense lncRNA gene Chr6:70021674-70032379 (-)
DBA/2J MGP_DBA2J_G0004205
 antisense lncRNA gene Chr6:62535577-62546280 (-)
FVB/NJ MGP_FVBNJ_G0004220
 antisense lncRNA gene Chr6:62058112-62068795 (-)
LP/J MGP_LPJ_G0004283
 antisense lncRNA gene Chr6:65632794-65643497 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004211
 antisense lncRNA gene Chr6:73711020-73721884 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004393
 antisense lncRNA gene Chr6:64768561-64779262 (-)
PWK/PhJ MGP_PWKPhJ_G0004110
 antisense lncRNA gene Chr6:61668424-61679305 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004054
 antisense lncRNA gene Chr6:64300844-64311481 (-)
WSB/EiJ MGP_WSBEiJ_G0004193
 antisense lncRNA gene Chr6:65056589-65069241 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085689 Ensembl Gene Model | MGI Sequence Detail 10706 C57BL/6J ±  kb
transcript ENSMUST00000144594 Ensembl | MGI Sequence Detail 816 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 4
    Phenotypes 1
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory