Gm16892 Gene Detail

Summary

• Symbol
  Gm16892
• Name
  predicted gene, 16892

• Feature Type
  lncRNA gene
• IDs
  MGI:4439816
  NCBI Gene: 100503632
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:56987764-56994776 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 34.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  284 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439816	lncRNA gene	Chr16:56987749-56996551 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005670	lincRNA gene	Chr16:56318602-56326759 (+)
A/J	MGP_AJ_G0005657	lincRNA gene	Chr16:53904368-53911055 (+)
AKR/J	MGP_AKRJ_G0005636	lincRNA gene	Chr16:55607683-55614547 (+)
BALB/cJ	MGP_BALBcJ_G0005637	lincRNA gene	Chr16:54007985-54014771 (+)
C3H/HeJ	MGP_C3HHeJ_G0005584	lincRNA gene	Chr16:55797968-55807397 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005794	lincRNA gene	Chr16:57881886-57890667 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0005527	lincRNA gene	Chr16:56183832-56191475 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0005589	lincRNA gene	Chr16:53641755-53648639 (+)
FVB/NJ	MGP_FVBNJ_G0005616	lincRNA gene	Chr16:53401365-53409172 (+)
LP/J	MGP_LPJ_G0005672	lincRNA gene	Chr16:56142036-56148748 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005601	lincRNA gene	Chr16:60570170-60577023 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005795	lincRNA gene	Chr16:55751930-55758732 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0005577	lincRNA gene	Chr16:55796820-55804765 (+)

Homology

• Gene Tree
  Gm16892
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000097876 (Evidence)
• NCBI Gene
  100503632

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097876	Ensembl Gene Model | MGI Sequence Detail	7013	C57BL/6J
transcript	ENSMUST00000180999	Ensembl | MGI Sequence Detail	1726	Not Applicable

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;