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Mir3080 Gene Detail
Summary
  • Symbol
    Mir3080
  • Name
    microRNA 3080
  • Synonyms
    mmu-mir-3080
Location &
Maps
more
  • Sequence Map
    Chr15:82843419-82843497 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 38.88 cM
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4834253
 miRNA gene Chr15:82843419-82843497 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008211
 miRNA gene Chr15:83602433-83602511 (-)
A/J MGP_AJ_G0008198
 miRNA gene Chr15:80559413-80559491 (-)
AKR/J MGP_AKRJ_G0008180
 miRNA gene Chr15:82874560-82874638 (-)
BALB/cJ MGP_BALBcJ_G0008182
 miRNA gene Chr15:80699612-80699690 (-)
C3H/HeJ MGP_C3HHeJ_G0008125
 miRNA gene Chr15:82872291-82872369 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008375
 miRNA gene Chr15:86828780-86828858 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007446
 miRNA gene Chr15:76957725-76957824 (-)
CAST/EiJ MGP_CASTEiJ_G0007996
 miRNA gene Chr15:83605787-83605865 (-)
CBA/J MGP_CBAJ_G0008093
 miRNA gene Chr15:89579066-89579144 (-)
DBA/2J MGP_DBA2J_G0008127
 miRNA gene Chr15:80061866-80061944 (-)
FVB/NJ MGP_FVBNJ_G0008151
 miRNA gene Chr15:79093383-79093461 (-)
LP/J MGP_LPJ_G0008210
 miRNA gene Chr15:83766918-83766996 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008116
 miRNA gene Chr15:94510627-94510705 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008367
 miRNA gene Chr15:82900481-82900559 (-)
PWK/PhJ MGP_PWKPhJ_G0007919
 miRNA gene Chr15:80032343-80032421 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007810
 miRNA gene Chr15:82618178-82618257 (-)
WSB/EiJ MGP_WSBEiJ_G0008075
 miRNA gene Chr15:83405974-83406052 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Mir3080
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100526477 NCBI Gene Model | MGI Sequence Detail 79 C57BL/6J ±  kb
transcript NR_037241 RefSeq | MGI Sequence Detail 79 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0014043
References
more
  • Summaries
    All 24
    Diseases 1
    Phenotypes 20
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory