Gm17324 Gene Detail

Summary

• Symbol
  Gm17324
• Name
  predicted gene, 17324

• Feature Type
  lncRNA gene
• IDs
  MGI:4936958
  NCBI Gene: 100579154
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:78355147-78356068 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 43.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4936958	lncRNA gene	Chr9:78355147-78356068 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0035070	protein coding gene	Chr9:78954871-78955804 (-)
A/J	MGP_AJ_G0035051	protein coding gene	Chr9:76228710-76229631 (-)
AKR/J	MGP_AKRJ_G0034979	protein coding gene	Chr9:78032953-78033874 (-)
BALB/cJ	MGP_BALBcJ_G0035039	protein coding gene	Chr9:75888588-75889509 (-)
C3H/HeJ	MGP_C3HHeJ_G0034751	protein coding gene	Chr9:78552159-78553080 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0035560	protein coding gene	Chr9:81085591-81086512 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032469	protein coding gene	Chr9:75458525-75459458 (-)
CAST/EiJ	MGP_CASTEiJ_G0034070	protein coding gene	Chr9:78834992-78835923 (-)
CBA/J	MGP_CBAJ_G0034724	protein coding gene	Chr9:83945836-83946757 (-)
DBA/2J	MGP_DBA2J_G0034882	protein coding gene	Chr9:75869144-75870065 (-)
FVB/NJ	MGP_FVBNJ_G0034825	protein coding gene	Chr9:75099904-75101243 (-)
LP/J	MGP_LPJ_G0034963	protein coding gene	Chr9:79182918-79183851 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0034867	protein coding gene	Chr9:85133309-85134230 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0035583	protein coding gene	Chr9:78201466-78202387 (-)
PWK/PhJ	MGP_PWKPhJ_G0033772	protein coding gene	Chr9:76065084-76066016 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0033609	protein coding gene	Chr9:78401298-78402230 (-)
WSB/EiJ	MGP_WSBEiJ_G0034185	protein coding gene	Chr9:78147700-78148621 (-)

Homology

• Gene Tree
  Gm17324
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  3
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm17324
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  5 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000090317 (Evidence)
• NCBI Gene
  100579154

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090317	Ensembl Gene Model | MGI Sequence Detail	922	C57BL/6J
transcript	ENSMUST00000165499	Ensembl | MGI Sequence Detail	922	Not Applicable
polypeptide	Q8C6J8	UniProt | EBI | MGI Sequence Detail	137	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 9
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9