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Spmip2 Gene Detail
Summary
  • Symbol
    Spmip2
  • Name
    sperm microtubule inner protein 2
  • Synonyms
    Gm17359
  • Feature Type
    protein coding gene
  • IDs
    MGI:4936993
    NCBI Gene: 100233207
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:79243968-79371436 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 3, 34.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3754 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4936993
protein coding gene Chr3:79243937-79371436 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027311
protein coding gene Chr3:79002427-79153363 (+)
A/J MGP_AJ_G0027273
protein coding gene Chr3:76447633-76575977 (+)
AKR/J MGP_AKRJ_G0027241
protein coding gene Chr3:78198970-78349591 (+)
BALB/cJ MGP_BALBcJ_G0027284
protein coding gene Chr3:76476699-76605559 (+)
C3H/HeJ MGP_C3HHeJ_G0027028
protein coding gene Chr3:78536867-78668350 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027730
protein coding gene Chr3:82045430-82179619 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025083
protein coding gene Chr3:72089107-72219422 (+)
CAST/EiJ MGP_CASTEiJ_G0026475
protein coding gene Chr3:78594227-78725599 (+)
CBA/J MGP_CBAJ_G0027003
protein coding gene Chr3:84741467-84896250 (+)
DBA/2J MGP_DBA2J_G0027139
protein coding gene Chr3:76008631-76134652 (+)
FVB/NJ MGP_FVBNJ_G0027107
protein coding gene Chr3:74349442-74475670 (+)
LP/J MGP_LPJ_G0027247
protein coding gene Chr3:79995270-80129513 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027126
protein coding gene Chr3:91015649-91157263 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027788
protein coding gene Chr3:78037027-78174882 (+)
PWK/PhJ MGP_PWKPhJ_G0026209
protein coding gene Chr3:75753996-75888464 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026025
protein coding gene Chr3:77190168-77319147 (+)
WSB/EiJ MGP_WSBEiJ_G0026553
protein coding gene Chr3:78370687-78500588 (+)



Homology
more
  • Human Ortholog
    SPMIP2, sperm microtubule inner protein 2
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SPMIP2, sperm microtubule inner protein 2
  • Synonyms
    C4orf45
  • Links
    NCBI Gene ID: 152940
    neXtProt AC: NX_Q96LM5
    UniProt: Q96LM5

  • Chr Location
    4q32.1; chr4:158893134-159082885 (-)  GRCh38

Human Diseases
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  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
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    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000091685 Ensembl Gene Model | MGI Sequence Detail 127469 C57BL/6J ±  kb
    transcript ENSMUST00000199658 Ensembl | MGI Sequence Detail 1819 Not Applicable  
    polypeptide ENSMUSP00000142709 Ensembl | MGI Sequence Detail 487 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      3 Sequences
    • InterPro Domains
      IPR027814 Protein of unknown function DUF4562
    Molecular
    Reagents
    less
    • All nucleic 3
      cDNA 3
    Other
    Accession IDs
    less
    MGI:7470723
    References
    more
    • Summaries
      All 22
      Developmental Gene Expression 1
      Diseases 1
      Phenotypes 13
    • Earliest
      J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    12/10/2024
    MGI 6.24
    The Jackson Laboratory