Gm17634 Gene Detail

Summary

• Symbol
  Gm17634
• Name
  predicted gene, 17634

• Feature Type
  lncRNA gene
• IDs
  MGI:4937268
  NCBI Gene: 100504568
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr1:105283732-105289462 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 49.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  216 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937268	lncRNA gene	Chr1:105283732-105289578 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002728	antisense lncRNA gene	Chr1:107457114-107462873 (+)
A/J	MGP_AJ_G0002704	antisense lncRNA gene	Chr1:103727381-103733143 (+)
AKR/J	MGP_AKRJ_G0002685	antisense lncRNA gene	Chr1:106557976-106563760 (+)
BALB/cJ	MGP_BALBcJ_G0002691	antisense lncRNA gene	Chr1:103817663-103823886 (+)
C3H/HeJ	MGP_C3HHeJ_G0002650	antisense lncRNA gene	Chr1:106979403-106986383 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002834	antisense lncRNA gene	Chr1:111606089-111613350 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002382	antisense lncRNA gene	Chr1:98088824-98094563 (+)
CAST/EiJ	MGP_CASTEiJ_G0002622	antisense lncRNA gene	Chr1:105904285-105912680 (+)
CBA/J	MGP_CBAJ_G0002645	antisense lncRNA gene	Chr1:115364200-115371843 (+)
DBA/2J	MGP_DBA2J_G0002651	antisense lncRNA gene	Chr1:102783243-102789244 (+)
FVB/NJ	MGP_FVBNJ_G0002671	antisense lncRNA gene	Chr1:101736038-101741690 (+)
LP/J	MGP_LPJ_G0002730	antisense lncRNA gene	Chr1:108723171-108729596 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002661	antisense lncRNA gene	Chr1:119824508-119831414 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002839	antisense lncRNA gene	Chr1:106635756-106644616 (+)
PWK/PhJ	MGP_PWKPhJ_G0002580	antisense lncRNA gene	Chr1:101839898-101846078 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002531	antisense lncRNA gene	Chr1:105286683-105293650 (+)
WSB/EiJ	MGP_WSBEiJ_G0002652	antisense lncRNA gene	Chr1:106468433-106474183 (+)

Homology

• Gene Tree
  Gm17634
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm17634
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  3

• Ensembl
  ENSMUSG00000097482 (Evidence)
• NCBI Gene
  100504568

Representative Sequences			Length	Strain/Species
genomic	100504568	NCBI Gene Model | MGI Sequence Detail	5731	C57BL/6J
transcript	NR_151538	RefSeq | MGI Sequence Detail	1392	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm17634:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8255	Chr1:105284442-105284493 (+)	736 bp
Tssr8256	Chr1:105284494-105284511 (+)	771 bp
Tssr8257	Chr1:105284571-105284582 (+)	845 bp
Tssr8258	Chr1:105284784-105284814 (+)	1,067 bp