Gm17068 Pseudogene Detail

Summary

• Symbol
  Gm17068
• Name
  predicted gene 17068

• Feature Type
  pseudogene
• IDs
  MGI:4937895
  NCBI Gene: 100158259
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:16255161-16256140 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 11.13 cM

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937895	pseudogene	Chr19:16255143-16256338 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011477	pseudogene	Chr19:13998672-13999651 (+)
A/J	MGP_AJ_G0011478	pseudogene	Chr19:13193204-13194183 (+)
AKR/J	MGP_AKRJ_G0011443	pseudogene	Chr19:13742754-13743733 (+)
BALB/cJ	MGP_BALBcJ_G0011458	pseudogene	Chr19:13238668-13239874 (+)
C3H/HeJ	MGP_C3HHeJ_G0011344	pseudogene	Chr19:13684364-13685343 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011748	pseudogene	Chr19:14559299-14561969 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010295	pseudogene	Chr19:13649239-13650228 (+)
CAST/EiJ	MGP_CASTEiJ_G0011142	pseudogene	Chr19:13262188-13263167 (+)
CBA/J	MGP_CBAJ_G0011314	pseudogene	Chr19:14998517-14999496 (+)
DBA/2J	MGP_DBA2J_G0011370	pseudogene	Chr19:13234240-13235335 (+)
FVB/NJ	MGP_FVBNJ_G0011376	pseudogene	Chr19:13160362-13161341 (+)
LP/J	MGP_LPJ_G0011439	pseudogene	Chr19:14003122-14004899 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011372	pseudogene	Chr19:14951950-14952962 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011732	pseudogene	Chr19:13655371-13656350 (+)
PWK/PhJ	MGP_PWKPhJ_G0011001	pseudogene	Chr19:12777032-12778174 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010827	pseudogene	Chr19:12954672-12955680 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm17068
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000078528 (Evidence)
• NCBI Gene
  100158259

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000078528	Ensembl Gene Model | MGI Sequence Detail	980	C57BL/6J
transcript	ENSMUST00000163135	Ensembl | MGI Sequence Detail	980	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;