Gm17099 Gene Detail

Summary

• Symbol
  Gm17099
• Name
  predicted gene 17099

• Feature Type
  lncRNA gene
• IDs
  MGI:4937926
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:45084295-45086459 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 24.84 cM

Strain
Comparison

• SNPs within 2kb
  215 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937926	lncRNA gene	Chr9:45084295-45086459 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004621	antisense lncRNA gene	Chr9:43720052-43722215 (+)
A/J	MGP_AJ_G0004602	antisense lncRNA gene	Chr9:42498544-42500708 (+)
AKR/J	MGP_AKRJ_G0004585	antisense lncRNA gene	Chr9:43374372-43376536 (+)
BALB/cJ	MGP_BALBcJ_G0004586	antisense lncRNA gene	Chr9:42231562-42233726 (+)
C3H/HeJ	MGP_C3HHeJ_G0004535	antisense lncRNA gene	Chr9:43832572-43834736 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004736	antisense lncRNA gene	Chr9:44995743-44997907 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004187	antisense lncRNA gene	Chr9:42052721-42055070 (+)
CAST/EiJ	MGP_CASTEiJ_G0004493	antisense lncRNA gene	Chr9:43689912-43692077 (+)
CBA/J	MGP_CBAJ_G0004529	antisense lncRNA gene	Chr9:46646779-46648943 (+)
DBA/2J	MGP_DBA2J_G0004544	antisense lncRNA gene	Chr9:42386783-42388947 (+)
FVB/NJ	MGP_FVBNJ_G0004562	antisense lncRNA gene	Chr9:41645555-41647719 (+)
LP/J	MGP_LPJ_G0004625	antisense lncRNA gene	Chr9:44017636-44019799 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004550	antisense lncRNA gene	Chr9:48467856-48470020 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004735	antisense lncRNA gene	Chr9:43294008-43296172 (+)
PWK/PhJ	MGP_PWKPhJ_G0004446	antisense lncRNA gene	Chr9:42274358-42276521 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004386	antisense lncRNA gene	Chr9:43584168-43586319 (+)
WSB/EiJ	MGP_WSBEiJ_G0004534	antisense lncRNA gene	Chr9:43322552-43324716 (+)

Homology

• Gene Tree
  Gm17099
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091659 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091659	Ensembl Gene Model | MGI Sequence Detail	2165	C57BL/6J
transcript	ENSMUST00000166780	Ensembl | MGI Sequence Detail	412	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;