Gm17232 Gene Detail

Summary

• Symbol
  Gm17232
• Name
  predicted gene 17232

• Feature Type
  lncRNA gene
• IDs
  MGI:4938059
  NCBI Gene: 105245779
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr14:63731148-63737321 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 33.31 cM

Strain
Comparison

• SNPs within 2kb
  253 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938059	lncRNA gene	Chr14:63731105-63740349 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003257	antisense lncRNA gene	Chr14:58018974-58025147 (+)
A/J	MGP_AJ_G0003233	antisense lncRNA gene	Chr14:56703679-56710059 (+)
AKR/J	MGP_AKRJ_G0003216	antisense lncRNA gene	Chr14:58714841-58721035 (+)
BALB/cJ	MGP_BALBcJ_G0003222	antisense lncRNA gene	Chr14:56659350-56665542 (+)
C3H/HeJ	MGP_C3HHeJ_G0003175	antisense lncRNA gene	Chr14:58327400-58333573 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003364	antisense lncRNA gene	Chr14:60768048-60774221 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002888	antisense lncRNA gene	Chr14:54644576-54650906 (+)
CAST/EiJ	MGP_CASTEiJ_G0003141	antisense lncRNA gene	Chr14:54793332-54799487 (+)
CBA/J	MGP_CBAJ_G0003172	antisense lncRNA gene	Chr14:62584870-62593760 (+)
DBA/2J	MGP_DBA2J_G0003177	antisense lncRNA gene	Chr14:56376574-56382747 (+)
FVB/NJ	MGP_FVBNJ_G0003196	antisense lncRNA gene	Chr14:55763340-55769534 (+)
LP/J	MGP_LPJ_G0003254	antisense lncRNA gene	Chr14:59043141-59049314 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003185	antisense lncRNA gene	Chr14:61815979-61822173 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003366	antisense lncRNA gene	Chr14:57867133-57873327 (+)
PWK/PhJ	MGP_PWKPhJ_G0003099	antisense lncRNA gene	Chr14:53049566-53056050 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003045	antisense lncRNA gene	Chr14:53838465-53845878 (+)
WSB/EiJ	MGP_WSBEiJ_G0003175	antisense lncRNA gene	Chr14:58195000-58201173 (+)

Homology

• Gene Tree
  Gm17232
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  11
• Chemically induced (other)
  1
• Gene trapped
  10
• Genomic Mutations
  1 involving Gm17232
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000090374 (Evidence)
• NCBI Gene
  105245779

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090374	Ensembl Gene Model | MGI Sequence Detail	6174	C57BL/6J
transcript	ENSMUST00000164515	Ensembl | MGI Sequence Detail	453	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

TSS for Gm17232:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr126132	Chr14:63731122-63731130 (+)	-22 bp
Tssr126133	Chr14:63731137-63731151 (+)	-4 bp