Ighv1-10 Pseudogene Detail

Summary

• Symbol
  Ighv1-10
• Name
  immunoglobulin heavy variable V1-10

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009837
  NCBI Gene: 637050
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:114561498-114561795 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.40 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  254 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009837	pseudogenic gene segment	Chr12:114561498-114561946 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0000219	pseudogenic gene segment	Chr12:117299073-117299509 (-)
A/J	MGP_AJ_G0000198	pseudogenic gene segment	Chr12:112781692-112782129 (-)
AKR/J	MGP_AKRJ_G0000196	pseudogenic gene segment	Chr12:116113730-116114168 (-)
BALB/cJ	MGP_BALBcJ_G0000196	pseudogenic gene segment	Chr12:113399596-113400032 (-)
C3H/HeJ	MGP_C3HHeJ_G0000192	pseudogenic gene segment	Chr12:116470013-116470451 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0000279	pseudogenic gene segment	Chr12:120908237-120908674 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000108	pseudogenic gene segment	Chr12:109101110-109101441 (+)
CAST/EiJ	MGP_CASTEiJ_G0000191	pseudogenic gene segment	Chr12:111270897-111271334 (-)
CBA/J	MGP_CBAJ_G0000185	pseudogenic gene segment	Chr12:125507311-125507749 (-)
DBA/2J	MGP_DBA2J_G0000185	pseudogenic gene segment	Chr12:112360584-112361020 (-)
FVB/NJ	MGP_FVBNJ_G0000189	pseudogenic gene segment	Chr12:111047100-111047536 (-)
LP/J	MGP_LPJ_G0000227	pseudogenic gene segment	Chr12:117225150-117225587 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000196	pseudogenic gene segment	Chr12:128786006-128786443 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000270	pseudogenic gene segment	Chr12:115494510-115494948 (-)
PWK/PhJ	MGP_PWKPhJ_G0000161	pseudogenic gene segment	Chr12:107015308-107015745 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0000146	pseudogenic gene segment	Chr12:109742888-109743326 (-)
WSB/EiJ	MGP_WSBEiJ_G0000199	pseudogenic gene segment	Chr12:116507133-116507569 (-)

Homology

• Gene Tree
  Ighv1-10
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000102502 (Evidence)
• NCBI Gene
  637050

Representative Sequences			Length	Strain/Species
genomic	637050	NCBI Gene Model | MGI Sequence Detail	298	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;