Igkv4-75 Pseudogene Detail

Summary

• Symbol
  Igkv4-75
• Name
  immunoglobulin kappa chain variable 4-75

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009863
  NCBI Gene: 692141
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:69133102-69133643 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 31.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009863	pseudogenic gene segment	Chr6:69133102-69133643 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0000270	pseudogenic gene segment	Chr6:69443099-69443569 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0000349	pseudogenic gene segment	Chr6:71110758-71111299 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0000280	pseudogenic gene segment	Chr6:69244876-69245346 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0000330	pseudogenic gene segment	Chr6:68375763-68376304 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Igkv4-75
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  9
• RefSeq
  1

• Ensembl
  ENSMUSG00000104712 (Evidence)
• NCBI Gene
  692141

Representative Sequences			Length	Strain/Species
genomic	692141	NCBI Gene Model | MGI Sequence Detail	542	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;