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Ighv5-21 Pseudogene Detail
Summary
  • Symbol
    Ighv5-21
  • Name
    immunoglobulin heavy variable V5-21
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:5009899
    NCBI Gene: 780832
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:114283650-114283944 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 62.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5009899
 pseudogenic gene segment Chr12:114283650-114283944 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0000187
 pseudogenic gene segment Chr12:115781611-115781905 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0000183
 pseudogenic gene segment Chr12:116147580-116147874 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000271
 pseudogenic gene segment Chr12:120595472-120595766 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0000182
 pseudogenic gene segment Chr12:110929126-110929420 (-)
CBA/J MGP_CBAJ_G0000178
 pseudogenic gene segment Chr12:125148039-125148333 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0000220
 pseudogenic gene segment Chr12:116931706-116932000 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000187
 pseudogenic gene segment Chr12:128416472-128416766 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000261
 pseudogenic gene segment Chr12:115189510-115189804 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    13
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 780832 NCBI Gene Model | MGI Sequence Detail 295 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 3
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory