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Trav3-2 Pseudogene Detail
Summary
  • Symbol
    Trav3-2
  • Name
    T cell receptor alpha variable 3-2
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:5009976
    NCBI Gene: 100126470
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr14:53823957-53824421 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    98 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5009976
pseudogenic gene segment Chr14:53823928-53824421 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0002572
pseudogenic gene segment Chr14:45819952-45820440 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0002715
pseudogenic gene segment Chr14:49414192-49414656 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0002512
pseudogenic gene segment Chr14:44198562-44199029 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0002535
pseudogenic gene segment Chr14:45468358-45468846 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0002617
pseudogenic gene segment Chr14:48437239-48437681 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002544
pseudogenic gene segment Chr14:49991272-49991577 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002720
pseudogenic gene segment Chr14:46706763-46707313 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0002539
pseudogenic gene segment Chr14:47063792-47064076 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104738 Ensembl Gene Model | MGI Sequence Detail 465 C57BL/6J ±  kb
transcript ENSMUST00000198999 Ensembl | MGI Sequence Detail 305 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory