Gm17796 Pseudogene Detail

Summary

• Symbol
  Gm17796
• Name
  predicted gene, 17796

• Feature Type
  pseudogene
• IDs
  MGI:5009982
  NCBI Gene: 100134981
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:131144614-131145826 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 56.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009982	pseudogene	Chr1:131144569-131146120 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010343	pseudogene	Chr1:134640142-134641316 (+)
A/J	MGP_AJ_G0010332	pseudogene	Chr1:129665792-129667004 (+)
AKR/J	MGP_AKRJ_G0010302	pseudogene	Chr1:133477333-133478545 (+)
BALB/cJ	MGP_BALBcJ_G0010308	pseudogene	Chr1:129994041-129995215 (+)
C3H/HeJ	MGP_C3HHeJ_G0010243	pseudogene	Chr1:133615232-133616444 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010583	pseudogene	Chr1:139643866-139645078 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009270	pseudogene	Chr1:122801203-122802452 (+)
CAST/EiJ	MGP_CASTEiJ_G0010066	pseudogene	Chr1:132616061-132617274 (+)
CBA/J	MGP_CBAJ_G0010212	pseudogene	Chr1:144453212-144454424 (+)
DBA/2J	MGP_DBA2J_G0010245	pseudogene	Chr1:128632242-128633416 (+)
FVB/NJ	MGP_FVBNJ_G0010269	pseudogene	Chr1:127257110-127258284 (+)
LP/J	MGP_LPJ_G0010329	pseudogene	Chr1:135956240-135957414 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010225	pseudogene	Chr1:150216645-150217857 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010545	pseudogene	Chr1:133245069-133246243 (+)
PWK/PhJ	MGP_PWKPhJ_G0009968	pseudogene	Chr1:127587651-127588863 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009779	pseudogene	Chr1:132172849-132174089 (+)
WSB/EiJ	MGP_WSBEiJ_G0010133	pseudogene	Chr1:133224718-133225930 (+)

Homology

• Gene Tree
  Gm17796
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm17796
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000101729 (Evidence)
• NCBI Gene
  100134981

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101729	Ensembl Gene Model | MGI Sequence Detail	1213	C57BL/6J
transcript	ENSMUST00000189015	Ensembl | MGI Sequence Detail	1213	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45