Gm17807 Pseudogene Detail

Summary

• Symbol
  Gm17807
• Name
  predicted gene, 17807

• Feature Type
  pseudogene
• IDs
  MGI:5009993
  NCBI Gene: 100294507
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:116560873-116561170 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009993	pseudogene	Chr12:116560869-116561306 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010961	pseudogene	Chr12:119455288-119455580 (+)
A/J	MGP_AJ_G0010965	pseudogene	Chr12:115091964-115092256 (+)
AKR/J	MGP_AKRJ_G0010919	pseudogene	Chr12:118583335-118583627 (+)
BALB/cJ	MGP_BALBcJ_G0010939	pseudogene	Chr12:115523535-115523827 (+)
C3H/HeJ	MGP_C3HHeJ_G0010836	pseudogene	Chr12:118856579-118856871 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011217	pseudogene	Chr12:123237959-123238256 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009812	pseudogene	Chr12:111503303-111503599 (+)
CAST/EiJ	MGP_CASTEiJ_G0010665	pseudogene	Chr12:112705826-112706125 (+)
CBA/J	MGP_CBAJ_G0010809	pseudogene	Chr12:128112434-128112726 (+)
DBA/2J	MGP_DBA2J_G0010858	pseudogene	Chr12:114455265-114455557 (+)
FVB/NJ	MGP_FVBNJ_G0010869	pseudogene	Chr12:113155075-113155367 (+)
LP/J	MGP_LPJ_G0010944	pseudogene	Chr12:119507060-119507357 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010853	pseudogene	Chr12:131435486-131435783 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011200	pseudogene	Chr12:117747964-117748256 (+)
PWK/PhJ	MGP_PWKPhJ_G0010549	pseudogene	Chr12:109220981-109221278 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010368	pseudogene	Chr12:110692742-110693022 (+)
WSB/EiJ	MGP_WSBEiJ_G0010713	pseudogene	Chr12:118704087-118704379 (+)

Homology

• Gene Tree
  Gm17807
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000101814 (Evidence)
• NCBI Gene
  100294507

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101814	Ensembl Gene Model | MGI Sequence Detail	298	C57BL/6J
transcript	ENSMUST00000186869	Ensembl | MGI Sequence Detail	298	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;