Gm17867 Pseudogene Detail

Summary

• Symbol
  Gm17867
• Name
  predicted gene, 17867

• Feature Type
  pseudogene
• IDs
  MGI:5010052
  NCBI Gene: 100416007
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:147379624-147380657 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 63.32 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  26 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010052	pseudogene	Chr1:147379606-147381780 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040227	pseudogene	Chr2:70255382-70257536 (+)
A/J	MGP_AJ_G0040211	pseudogene	Chr2:67541984-67544157 (+)
AKR/J	MGP_AKRJ_G0040145	pseudogene	Chr2:69376786-69378959 (+)
BALB/cJ	MGP_BALBcJ_G0040212	pseudogene	Chr2:67721840-67724014 (+)
C3H/HeJ	MGP_C3HHeJ_G0039851	pseudogene	Chr2:69593967-69596140 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0037238	pseudogene	Chr2:64767417-64769572 (+)
CAST/EiJ	MGP_CASTEiJ_G0038936	pseudogene	Chr2:69733154-69735310 (+)
CBA/J	MGP_CBAJ_G0039819	pseudogene	Chr2:75055275-75057448 (+)
DBA/2J	MGP_DBA2J_G0040012	pseudogene	Chr2:67172598-67174771 (+)
FVB/NJ	MGP_FVBNJ_G0039969	pseudogene	Chr2:66544648-66546821 (+)
LP/J	MGP_LPJ_G0040057	pseudogene	Chr2:70112073-70114246 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039965	pseudogene	Chr2:77102222-77104395 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040898	pseudogene	Chr2:69471198-69473371 (+)
PWK/PhJ	MGP_PWKPhJ_G0038627	pseudogene	Chr2:67020241-67022410 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038324	pseudogene	Chr2:69692382-69694549 (+)
WSB/EiJ	MGP_WSBEiJ_G0039154	pseudogene	Chr2:69892004-69894177 (+)

Homology

• Gene Tree
  Gm17867
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm17867
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000100380 (Evidence)
• NCBI Gene
  100416007

Representative Sequences			Length	Strain/Species
genomic	100416007	NCBI Gene Model | MGI Sequence Detail	1034	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;