Gm17887 Pseudogene Detail

Summary

• Symbol
  Gm17887
• Name
  predicted gene, 17887

• Feature Type
  pseudogene
• IDs
  MGI:5010072
  NCBI Gene: 100416041
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:36475743-36476273 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 17.45 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010072	pseudogene	Chr3:36475725-36476273 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012094	pseudogene	Chr3:34208564-34209110 (+)
A/J	MGP_AJ_G0012086	pseudogene	Chr3:33566504-33567050 (+)
AKR/J	MGP_AKRJ_G0012047	pseudogene	Chr3:34176545-34177091 (+)
BALB/cJ	MGP_BALBcJ_G0012062	pseudogene	Chr3:33324918-33325464 (+)
C3H/HeJ	MGP_C3HHeJ_G0011940	pseudogene	Chr3:34238502-34239048 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012369	pseudogene	Chr3:35865445-35865991 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010805	pseudogene	Chr3:31262994-31263540 (+)
CAST/EiJ	MGP_CASTEiJ_G0011724	pseudogene	Chr3:34089059-34089605 (+)
CBA/J	MGP_CBAJ_G0011913	pseudogene	Chr3:36833455-36834001 (+)
DBA/2J	MGP_DBA2J_G0011967	pseudogene	Chr3:33020951-33021497 (+)
FVB/NJ	MGP_FVBNJ_G0011975	pseudogene	Chr3:32479117-32479663 (+)
LP/J	MGP_LPJ_G0012043	pseudogene	Chr3:34986951-34987497 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011977	pseudogene	Chr3:39253368-39253914 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012378	pseudogene	Chr3:34026685-34027231 (+)
PWK/PhJ	MGP_PWKPhJ_G0011568	pseudogene	Chr3:32668113-32668659 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011384	pseudogene	Chr3:33398351-33398897 (+)
WSB/EiJ	MGP_WSBEiJ_G0011746	pseudogene	Chr3:34045492-34046038 (+)

Homology

• Gene Tree
  Gm17887
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm17887
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105792 (Evidence)
• NCBI Gene
  100416041

Representative Sequences			Length	Strain/Species
genomic	100416041	NCBI Gene Model | MGI Sequence Detail	531	C57BL/6J

References

• Summaries
  All 5

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426