Gm18010 Pseudogene Detail

Summary

• Symbol
  Gm18010
• Name
  predicted gene, 18010

• Feature Type
  pseudogene
• IDs
  MGI:5010195
  NCBI Gene: 100416268
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:49149693-49149894 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 23.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010195	pseudogene	Chr6:49149606-49150457 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013450	pseudogene	Chr6:48163766-48163967 (+)
A/J	MGP_AJ_G0013434	pseudogene	Chr6:45969042-45969243 (+)
AKR/J	MGP_AKRJ_G0013398	pseudogene	Chr6:47587212-47587413 (+)
BALB/cJ	MGP_BALBcJ_G0013412	pseudogene	Chr6:46305172-46305373 (+)
C3H/HeJ	MGP_C3HHeJ_G0013262	pseudogene	Chr6:47592994-47593195 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013796	pseudogene	Chr6:49297119-49297320 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011884	pseudogene	Chr6:43576199-43576397 (+)
CAST/EiJ	MGP_CASTEiJ_G0012970	pseudogene	Chr6:47313294-47313495 (+)
CBA/J	MGP_CBAJ_G0013231	pseudogene	Chr6:51343275-51343476 (+)
DBA/2J	MGP_DBA2J_G0013315	pseudogene	Chr6:45879313-45879514 (+)
FVB/NJ	MGP_FVBNJ_G0013311	pseudogene	Chr6:45522433-45522634 (+)
LP/J	MGP_LPJ_G0013385	pseudogene	Chr6:48145315-48145516 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013329	pseudogene	Chr6:54100613-54100814 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013792	pseudogene	Chr6:47450589-47450790 (+)
PWK/PhJ	MGP_PWKPhJ_G0012781	pseudogene	Chr6:45426372-45426573 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012562	pseudogene	Chr6:46796394-46796592 (+)
WSB/EiJ	MGP_WSBEiJ_G0013013	pseudogene	Chr6:47449271-47449472 (+)

Homology

• Gene Tree
  Gm18010
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107727 (Evidence)
• NCBI Gene
  100416268

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107727	Ensembl Gene Model | MGI Sequence Detail	202	C57BL/6J
transcript	ENSMUST00000203553	Ensembl | MGI Sequence Detail	202	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;