Rpl15-ps5 Pseudogene Detail

Summary

• Symbol
  Rpl15-ps5
• Name
  ribosomal protein L15, pseudogene 5
• Synonyms
  Gm18047

• Feature Type
  pseudogene
• IDs
  MGI:5010232
  NCBI Gene: 100416334
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:97244044-97244648 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 53.55 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010232	pseudogene	Chr7:97244042-97244648 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013967	pseudogene	Chr7:100302055-100302562 (-)
A/J	MGP_AJ_G0013986	pseudogene	Chr7:97812553-97813502 (-)
AKR/J	MGP_AKRJ_G0013920	pseudogene	Chr7:100144164-100147271 (-)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0014375	pseudogene	Chr7:104204158-104204717 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0013838	pseudogene	Chr7:95958612-95959704 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0013864	pseudogene	Chr7:109253847-109254537 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014336	pseudogene	Chr7:99428384-99429218 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rpl15-ps5
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  22 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Rpl15-ps5
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  1

• Ensembl
  ENSMUSG00000108442 (Evidence)
• NCBI Gene
  100416334

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108442	Ensembl Gene Model | MGI Sequence Detail	605	C57BL/6J
transcript	ENSMUST00000205636	Ensembl | MGI Sequence Detail	605	Not Applicable

References

• Summaries
  All 26

  Phenotypes 22
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67