Gm18150 Pseudogene Detail

Summary

• Symbol
  Gm18150
• Name
  predicted gene, 18150

• Feature Type
  pseudogene
• IDs
  MGI:5010335
  NCBI Gene: 100416531
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:37147109-37147684 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 19.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010335	pseudogene	Chr18:37146901-37147687 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040204	pseudogene	Chr18:35419941-35420727 (+)
A/J	MGP_AJ_G0040191	pseudogene	Chr18:34191546-34192332 (+)
AKR/J	MGP_AKRJ_G0040126	pseudogene	Chr18:35152957-35153743 (+)
BALB/cJ	MGP_BALBcJ_G0040187	pseudogene	Chr18:34240853-34241639 (+)
C3H/HeJ	MGP_C3HHeJ_G0039827	pseudogene	Chr18:35205263-35206049 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040778	pseudogene	Chr18:36687763-36688549 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037225	pseudogene	Chr18:34278086-34278868 (+)
CAST/EiJ	MGP_CASTEiJ_G0038916	pseudogene	Chr18:35207777-35208563 (+)
CBA/J	MGP_CBAJ_G0039795	pseudogene	Chr18:37773945-37774731 (+)
DBA/2J	MGP_DBA2J_G0039991	pseudogene	Chr18:33809390-33810176 (+)
FVB/NJ	MGP_FVBNJ_G0039950	pseudogene	Chr18:33521668-33522454 (+)
LP/J	MGP_LPJ_G0040033	pseudogene	Chr18:35494782-35495568 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039942	pseudogene	Chr18:39023184-39023970 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040874	pseudogene	Chr18:35024712-35025498 (+)
PWK/PhJ	MGP_PWKPhJ_G0038605	pseudogene	Chr18:34053427-34054213 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038306	pseudogene	Chr18:35272698-35273483 (+)
WSB/EiJ	MGP_WSBEiJ_G0039136	pseudogene	Chr18:34926335-34927120 (+)

Homology

• Gene Tree
  Gm18150
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm18150
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000103601 (Evidence)
• NCBI Gene
  100416531

Representative Sequences			Length	Strain/Species
genomic	100416531	NCBI Gene Model | MGI Sequence Detail	576	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:244163 Hasegawa S, et al., Distinct and Cooperative Functions for the Protocadherin-alpha, -beta and -gamma Clusters in Neuronal Survival and Axon Targeting. Front Mol Neurosci. 2016;9:155
• Latest
  J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)